Pairwise Alignments

Query, 687 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 676 a.a., integral membrane sensor signal transduction histidine kinase from Marinobacter adhaerens HP15

 Score =  231 bits (588), Expect = 1e-64
 Identities = 189/652 (28%), Positives = 300/652 (46%), Gaps = 60/652 (9%)

Query: 47  LYAYPLAGAILLDGKLNEWQEYQHRFIQYGEANQIMRADPSAPLTLSFTHMVGQYDG--- 103
           +Y  P AG + LDG  ++W  Y        EANQ       A      T +  Q      
Sbjct: 68  IYVEPFAGNLNLDGYADDWPGYD-------EANQTRNWQRVASGKAGETALQWQAATDRR 120

Query: 104 YLYAFFQVVDPNVVFRGKNALSVDRNDHLSI------ATLAPDNKFKRYIVATTQPGWIS 157
            LY   +V     VF    +     +D L +        LA ++  + +++ T  PG + 
Sbjct: 121 NLYLLIRVSHRQPVFFNPGSPE-QAHDRLRLWLEPSGGNLAQESGRQSWLLRTPAPGQLY 179

Query: 158 AFELPANPKQTVPVTPEVRIQGQWATTDVGYNIELRIPLDMVGSKLGFAIADVNDSKYRD 217
             E            P+ R+ G       G+ +EL++P+ +  S+LGFA    +D     
Sbjct: 180 GLEEKGGQ-------PDYRLSGFLQGAGDGWQLELKLPMPVDRSRLGFAALWSSDQ---- 228

Query: 218 VAAVVGTSALDTVDKLGTVLVPSPEIENIIKGMSHYSSRIWVIDKHGRVLAKSGDIRDSN 277
              V G S   +VD L  ++  +  +E  ++   +   +  +++  G V+A+    +  +
Sbjct: 229 ---VTGVST--SVDPLPVLVSRNLALERQLEPQLNPGQQARLVEPAGWVIARQ---QADS 280

Query: 278 SVWTRTLDDENSNGLWQRFQRDYLHPLYYKILTKPPKDFIDSLRDSTELNGSHIQKALAG 337
           +V     D  +   + ++   + L  L    L +P    I++  +  ++        +  
Sbjct: 281 AVTAPEFDSLSPVQVIEKISLNALRGLVR--LYQPEPTSIETDTNRVDVEALPETSLVRH 338

Query: 338 QQTSTWRLTPDNKAVVLAAASPIWIDNNVMGA--VVAEETTHGIRTLRNRALEKLFNVIL 395
           +  S W LT                   V G   ++ E++   + TL   AL  +     
Sbjct: 339 EDDSVWLLTT----------------REVFGGRTLILEQSLDQLLTLSGSALGSVIARST 382

Query: 396 TIMSMGTLALFFFASSISNRIRKLRDEAENAIDSQGRVRNHLKPSKARDEIGDLSRSFAS 455
            I+   TL L  +AS +S RI +L+     +ID  GR+   +  ++++DE+G L R F+ 
Sbjct: 383 LIIVALTLVLLGYASWLSWRITRLQRAVSASIDEDGRITGRVPDARSKDELGQLQRHFSQ 442

Query: 456 IVGRLGQYTHYLENMSSRLSHELRTPVAVVRSSLEHLNLQTLDKDTQKYVDRAQEGVSRL 515
           +V RL  Y  YLE+ S RLSHEL+TPVAVVRSSLE+LN    +++ ++Y++RA     RL
Sbjct: 443 MVDRLHGYNRYLESFSRRLSHELKTPVAVVRSSLENLNHSDSEEERRQYIERAASATERL 502

Query: 516 SMILNNMSEATRLEQSLTQADVTKFPLSQVVSGCMQGYQMTYPEQRFSIKVPDQPLMMQG 575
             IL+ MSEA RLEQSL  AD  +F L++V +     YQ      +     P     + G
Sbjct: 503 RQILHGMSEAARLEQSLDHADKEQFDLAEVAAEATAAYQALDSSHQIRYSGPQAGCKITG 562

Query: 576 VPEYIAQLMDKLIANAIEFCHQGSSIEVTLTQVGKQATLLISNLGPQLPVDMSEQIFDSM 635
            PE + QL+DKL+ NA +F  Q   IEV L    +   L + N G  LP D +  IF   
Sbjct: 563 SPELMVQLLDKLVDNARDFTPQDGLIEVGLETTSEGLCLSVFNEGSTLPEDTTTDIFSPF 622

Query: 636 VSVRDNQTQEKPHLGLGLYIARLVTEFHQGNILARNRSEN--DGVDILVTLP 685
           VS+RD   QE+ HLG GL I  L+ ++H  ++ ARNR++   DGV   V +P
Sbjct: 623 VSMRDG--QEQGHLGQGLLIVNLIADYHGAHVEARNRAQGGIDGVCFRVMIP 672