Pairwise Alignments

Query, 687 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 840 a.a., PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3) from Paraburkholderia bryophila 376MFSha3.1

 Score = 85.1 bits (209), Expect = 1e-20
 Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 28/286 (9%)

Query: 407 FFASSISNRIRKLRDEAENAIDSQGRVRNHLKPSKARDEIGDLSRSFASIVGRLGQYTHY 466
           F+A++I   +R    +   A+    ++   +   +  +E+   S+  +  +G LG     
Sbjct: 430 FWANTIVTALR----DPNGALQGFAKITRDMSRRRRMEELEASSQRMSQFLGLLG----- 480

Query: 467 LENMSSRLSHELRTPVAVVRSSLEHLNLQTLDKDT----QKYVDRAQEGVSRLSMILNNM 522
                    HELR P+A +R+++  L L++   +      + +DR    +S L+ +++++
Sbjct: 481 ---------HELRNPLAPLRNAVSMLQLKSKGHEAFLPEHELIDRQ---LSHLTRLVDDL 528

Query: 523 SEATRLEQSLTQADVTKFPLSQVVSGCMQGYQ--MTYPEQRFSIKVPDQPLMMQGVPEYI 580
            +A R+         T   L  VV   ++G    +    Q  ++ +PD+P+ + G    +
Sbjct: 529 LDAGRVTLGRVHITPTPCALQAVVQLSIEGSAPLLAARNQTLNVSMPDEPMRVNGDLTRL 588

Query: 581 AQLMDKLIANAIEFCHQGSSIEVTLTQVGKQATLLISNLGPQLPVDMSEQIFDSMVSVRD 640
            Q++  L+ NA +F   G+SI++T+ +  +   + I + G  +  D  + +F+  V    
Sbjct: 589 VQVVQNLLNNASKFSPIGASIDLTVFRSARLLAIRIDDPGRGIEPDAIDAMFNLFVQETP 648

Query: 641 NQTQ-EKPHLGLGLYIARLVTEFHQGNILARNRSENDGVDILVTLP 685
            + Q +K  LG+GL +AR + + H G+I AR+     G    V LP
Sbjct: 649 TEEQADKSGLGIGLTLARAIVDLHGGHIDARSAGRGKGSSFTVWLP 694