Pairwise Alignments

Query, 687 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 501 a.a., two-component system, OmpR family, heavy metal sensor histidine kinase CusS from Paraburkholderia bryophila 376MFSha3.1

 Score = 86.7 bits (213), Expect = 2e-21
 Identities = 71/303 (23%), Positives = 139/303 (45%), Gaps = 15/303 (4%)

Query: 371 VAEETTHGIRTLRNRALEKLFNVILTIMS-MGTLALFFFASSISN----RIRKLRDEAEN 425
           VA   +  IRT+R      +F   L  +S +G+LA+   + S++      + +L  +A +
Sbjct: 142 VASSYSPNIRTMR------VFGFALAALSALGSLAVLLLSYSVTRIGLAPLTRLTRDA-S 194

Query: 426 AIDSQGRVRNHLKPSKARDEIGDLSRSFASIVGRLGQYTHYLENMSSRLSHELRTPVAVV 485
           A+    R +  L  +    E+ DL+ SF   + RL      LE+ ++ ++HELRTPV ++
Sbjct: 195 AVSPNNRSQR-LNTTSLPHELNDLANSFNGALERLDGAYCRLESFNADVAHELRTPVTIL 253

Query: 486 RSSLEHLNLQTLDKDTQKYVDRAQ-EGVSRLSMILNNMSEATRLEQSLTQADVTKFPLSQ 544
               E    +    D  ++  ++  E   R+  I+N+M    R +Q      + +  L+ 
Sbjct: 254 IGQTEVALTRNRSVDDLRHTLQSNLEEFERMRAIINDMLFLARADQGERATGLVEVSLAA 313

Query: 545 VVSGCMQGYQMTYPEQRFSIKVPDQPLMMQGVPEYIAQLMDKLIANAIEFCHQGSSIEVT 604
            V+  ++  ++   E R   ++               +    L+ NAI+ C  G+ I V 
Sbjct: 314 EVAHTLEFLEIPLEEARVHARLHGDAAAHVN-RSLFGRACTNLLMNAIQHCQPGAQINVR 372

Query: 605 LTQVGKQATLLISNLGPQLPVDMSEQIFDSMVSVRDNQTQEKPHLGLGLYIARLVTEFHQ 664
           + + G+Q  + ++N G  +   + E +FD       ++T  + + GLGL I + + E H+
Sbjct: 373 IVRDGQQVRIEVANPGEPIEPAVLEHLFDRFYRAEASRTNSRENHGLGLAIVKAIAEMHR 432

Query: 665 GNI 667
           G++
Sbjct: 433 GSV 435