Pairwise Alignments

Query, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 424 a.a., heat-shock protein from Pseudomonas fluorescens FW300-N2C3

 Score =  174 bits (442), Expect = 4e-48
 Identities = 136/487 (27%), Positives = 226/487 (46%), Gaps = 85/487 (17%)

Query: 4   GFDYGSANCAVGIMQGDEVSLLPLSTDSAYLPSTLYAMDRELIAEAVYRALPAELKADYA 63
           G D+G++N  VG ++    +L+ L  D   LPS ++                        
Sbjct: 11  GIDFGTSNSTVGWLRPGMETLIALEDDKITLPSVVF------------------------ 46

Query: 64  KKRAAQLSRARMVRHELDLDAESPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGATGLRP 123
                            +L+   P    G  A+  YLE   EG  +RS KS LG+  ++ 
Sbjct: 47  ----------------FNLEERRPVY--GRLALHEYLE-GYEGRLMRSLKSLLGSKLIKH 87

Query: 124 EQVAL-----FEDIVTLMMQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIGGE 178
           +   L     F+D++ L +  +K RAEA   ++             V+GRPV F     E
Sbjct: 88  DTSVLGTAMPFKDLLGLFIGQLKKRAEATAGRE---------FEEVVLGRPVFFVD-DDE 137

Query: 179 ESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEAGLKADQTVLVVDVGGGTTDCSVV 238
            ++++AE  L   A+  GF +V+F +EP+AA  DYE+ ++ ++ VL+VD+GGGT+D S+V
Sbjct: 138 MADQEAENTLVDVARAIGFKEVSFQYEPIAAAFDYESTIEKEELVLIVDIGGGTSDFSLV 197

Query: 239 KMGPSHKASFDRSRDCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPFW 298
           ++ P  +   +R  D L   G  IGG D D  L++   MP FG GS M +G  MP++   
Sbjct: 198 RLSPERRTHDNRHADILATGGVHIGGTDFDKQLSLAGLMPLFGYGSRMKSGAYMPTSHHM 257

Query: 299 NAV---AVNDISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAER 355
           N      +N + +Q+    L + +       + E    + RL K+ +Q+  + +    E 
Sbjct: 258 NLATWHTINAVYSQKSTLALGSMRY------DIEDTGGIDRLFKLIEQRAGHWLAMEVEE 311

Query: 356 AKIALSDAHTTESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTGN 415
            KI L+        L+ IE  LS E++R  FE+AI+  L ++   + Q L  A       
Sbjct: 312 TKIELTHTDQRHLLLDRIEPGLSVELSRALFESAIDGLLERVRGSVTQLLGDA------- 364

Query: 416 GLAPEELSVEAGTAECQPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLT 475
                ++ V+      Q D ++ TGG++  PA+   ++++ P    V G+ FGS+ +GL 
Sbjct: 365 -----DVRVD------QVDTVFFTGGSSGIPALRNSVSAMLPQARHVEGNIFGSIGSGLA 413

Query: 476 RWAQKHF 482
             A K +
Sbjct: 414 IEAMKRY 420