Pairwise Alignments

Query, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 450 a.a., molecular chaperone from Vibrio cholerae E7946 ATCC 55056

 Score =  386 bits (992), Expect = e-112
 Identities = 216/485 (44%), Positives = 292/485 (60%), Gaps = 39/485 (8%)

Query: 1   MFVGFDYGSANCAVGIMQGDEVSLLPLSTDSAYLPSTLYAMDRELIAEAVYR---ALPAE 57
           MF+GFDYG+ANC+V  MQ     L+PL  DS Y+PSTL A  RE ++E ++R     PA+
Sbjct: 1   MFIGFDYGTANCSVASMQDGRPVLIPLEGDSLYIPSTLAAPTRESVSEHLFRHRHIAPAD 60

Query: 58  LKADYAKKRAAQLSRARMVRHELDLDAESPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLG 117
              +   +R+   +R      E  +D +   V  G+ A+  YL  P E +YV+SPKSFLG
Sbjct: 61  ALGEQLLRRSVASNR------EEGIDLQFADVVFGQAALDLYLSDPHEVYYVKSPKSFLG 114

Query: 118 ATGLRPEQVALFEDIVTLMMQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIGG 177
           A GL   Q++ FED+V  MM +IK +AEA           +A I  AVIGRPVNF G GG
Sbjct: 115 AMGLHDIQLSFFEDLVCAMMANIKAQAEA---------HSDAVIQDAVIGRPVNFHGRGG 165

Query: 178 EESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEAGLKADQTVLVVDVGGGTTDCSV 237
           E+SN+QAE IL  AA RAGF  + F FEP+AAG++YEA L  D+TVLVVD+GGGTTDCS+
Sbjct: 166 EDSNQQAENILRRAATRAGFRHLEFQFEPVAAGLEYEATLTEDKTVLVVDIGGGTTDCSL 225

Query: 238 VKMGPSHKASFDRSRDCLGHSGQRIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPSNPF 297
           ++MGPS +   DR++  + H+GQR+GGNDLDI LA  A M  FG G+   +G  MP   F
Sbjct: 226 IQMGPSWRGKADRTQSLIAHTGQRVGGNDLDIHLAFKALMTPFGFGTQTQSGLDMPITQF 285

Query: 298 WNAVAVNDISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAERAK 357
           WN +A+ND+SAQ +F +      +  L KEA +P  L RLL V    L Y +V+ AE AK
Sbjct: 286 WNPIAINDVSAQAKFFSRENLADLKRLHKEAREPEKLARLLAVYHDTLGYSLVKKAEEAK 345

Query: 358 IALSDAHTTESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTGNGL 417
           IALSD     + ++ +  +L  E+ R+    AI+    K+  L+ +A+T    +      
Sbjct: 346 IALSDTARAIAQIKVLSELLEVEIQREAMIEAIDVPKTKMIELVTEAVTLGGVT------ 399

Query: 418 APEELSVEAGTAECQPDVIYVTGGTARSPAIYAKITSLYPDTPVVVGDHFGSVTAGLTRW 477
                          PDVI++TGG+ARSP + A +    P+ P+V G++FGSVTAGL RW
Sbjct: 400 ---------------PDVIFMTGGSARSPILRAGVEQALPNVPIVSGNYFGSVTAGLARW 444

Query: 478 AQKHF 482
           AQ  F
Sbjct: 445 AQVCF 449