Pairwise Alignments

Query, 484 a.a., hypothetical heat shock protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 636 a.a., molecular chaperone DnaK from Pantoea sp. MT58

 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 110/480 (22%), Positives = 190/480 (39%), Gaps = 128/480 (26%)

Query: 3   VGFDYGSANCAVGIMQGDEVSLLPLSTDSAYLPSTL-YAMDRELIA--EAVYRALPAELK 59
           +G D G+ N  V IM G +  +L  +      PS + Y  D E++    A  +A+     
Sbjct: 5   IGIDLGTTNSCVAIMDGTKARVLENAEGDRTTPSIIAYTQDGEILVGQPAKRQAVTNPQN 64

Query: 60  ADYAKKRAAQLSRARMVRHELDLDAE-SPAVFVGEQAVAAYLEMPEEGFYVRSPKSFLGA 118
             +A KR   L   R    E+  D +  P    G     A+LE+  +             
Sbjct: 65  TLFAIKR---LIGRRFQDEEVQRDIKIMPYKITGADNGDAWLEVKGQR------------ 109

Query: 119 TGLRPEQVALFEDIVTLMMQHIKVRAEAVLVQKGMASKDEARITHAVIGRPVNFQGIGGE 178
             + P Q++        +++ +K  AE  L +          +T AVI  P  F      
Sbjct: 110 --MAPPQIS------AEVLKKMKKTAEDYLGEP---------VTEAVITVPAYFND-AQR 151

Query: 179 ESNRQAEAILTLAAKRAGFVDVAFLFEPLAAGMDYEAGL---KADQTVLVVDVGGGTTDC 235
           ++ + A  I  L  KR        + EP AA + Y  GL   + ++T+ V D+GGGT D 
Sbjct: 152 QATKDAGRIAGLEVKR-------IINEPTAAALAY--GLDKGQGNRTIAVYDLGGGTFDI 202

Query: 236 SVVKMGPSHKASFDRSRDCLGHSGQ-RIGGNDLDIALAMNAFMPHFGLGSLMSNGKPMPS 294
           S++++    +   +++ + L  +G   +GG D D  L +N  +  F        G  + +
Sbjct: 203 SIIEID---EVDGEKTFEVLATNGDTHLGGEDFDSRL-INYLVAEFK----KDQGIDLHN 254

Query: 295 NPFWNAVAVNDISAQREFATLSTRKLIDELIKEAEQPNLLKRLLKVQQQQLSYQIVRLAE 354
           +P         ++ QR              +KEA                        AE
Sbjct: 255 DP---------LAMQR--------------LKEA------------------------AE 267

Query: 355 RAKIALSDAHTTESSLEFIEAMLSAEVNRDCFENAIEPSLGKIEALMHQALTQAAKSLTG 414
           +AKI LS A  T+ +L +I A  +   + +     I+ +  K+E+L+        + L  
Sbjct: 268 KAKIELSSAQQTDVNLPYITADATGPKHLN-----IKVTRSKLESLV--------EDLVA 314

Query: 415 NGLAPEELSV-EAGTAECQPDVIYVTGGTARSPAIYAKITSLY---------PDTPVVVG 464
             +AP ++++ +AG +    + + + GG  R P + AK+T  +         PD  V VG
Sbjct: 315 RSIAPLKVALQDAGLSVSDINDVILVGGQTRMPLVQAKVTEFFGKEPRKDVNPDEAVAVG 374