Pairwise Alignments

Query, 291 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 294 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  464 bits (1193), Expect = e-135
 Identities = 220/286 (76%), Positives = 245/286 (85%)

Query: 1   MQLFVKDLTVIDFSYLCPKRGMVGESWIVDVVLEGGLDEQNMVLDFAKVKRTIKHTIDAV 60
           MQLFVKDLTV+DFSYLC KRGMVGESWIVDVVLEGGLD QNMVLDFAKVKRTIK TID V
Sbjct: 1   MQLFVKDLTVLDFSYLCAKRGMVGESWIVDVVLEGGLDSQNMVLDFAKVKRTIKDTIDRV 60

Query: 61  ADHRLLVPTACSGVRWQQLGDRVWLDFESLQGEIHLACPSQAFALVPSEQIDIPSVSAFL 120
           ADHRLL+PTA S VRWQQ GDRVW+DF S  G IHLACPSQAFAL+P+E +D  +V+AFL
Sbjct: 61  ADHRLLIPTASSNVRWQQQGDRVWMDFHSDVGNIHLACPSQAFALIPAEHVDFEAVNAFL 120

Query: 121 QKALRETLPNNVEGIHLTLRHEVLNSPYYHYSHGLRKHDGNCQRIAHGHRSPVQVFENGV 180
           +KALRE LP+NV+GIHLTLR E L+ P+YHYSHGL+KHDGNCQRIAHGHRSPVQ+FENG 
Sbjct: 121 RKALREALPDNVDGIHLTLRTESLSGPFYHYSHGLKKHDGNCQRIAHGHRSPVQIFENGE 180

Query: 181 PALKWDEYWAKRWHDIYLGSEEDLVSVKSLTLSPQTQVSDESHYGFYYQAPQGNFQLAMP 240
            A  WD YWAKRW DIYLG+EED+V V  L LS Q ++ D SH GF Y+APQG+FQLAMP
Sbjct: 181 SAPDWDAYWAKRWKDIYLGTEEDVVPVAELELSAQCRIDDNSHIGFRYEAPQGDFQLAMP 240

Query: 241 KECCDLIPHDTTVELLADYMATTLATKVPSSQFTVIAYEGVGKGAI 286
           +  CD+IPHDTTVELLAD+MA TLA KVP S F VIAYEG+GKGAI
Sbjct: 241 RAICDIIPHDTTVELLADFMAKTLADKVPGSHFKVIAYEGIGKGAI 286