Pairwise Alignments

Query, 342 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 335 a.a., Nucleoid-associated protein YejK from Enterobacter sp. TBS_079

 Score =  293 bits (749), Expect = 6e-84
 Identities = 150/341 (43%), Positives = 221/341 (64%), Gaps = 8/341 (2%)

Query: 1   MSINIEQAIIHEISQDSQGQLRCRLRPQPLLNGQAVEMMLEELHQTYTSKSGKGFGYFGI 60
           MS+ I Q  +H++ +  +  L   LR   L     V  M+ ELH+ Y++K+ K +G F  
Sbjct: 1   MSLEINQIALHQLIKRDEQTLEVVLRDSLLEPTATVVEMMAELHRVYSAKN-KAYGLFSE 59

Query: 61  HGDDGEANPAFANALKEYRAGDLGFVEFTGQASKLLQEELAKYDFSQGGFLLMSCYTSMA 120
             +        A++L+  R G+  F+ F+  A+  L++ELAKY F+ GG +L   Y  +A
Sbjct: 60  ESE-------LADSLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLA 112

Query: 121 SDYLFVALLSAKSSMTVLDDMELSQNNHLDLNNIQLAARIDLTELQADKDSRKYISFIRG 180
            +YL V +L+  SSM V + +++S  ++LD+N+  + ARIDLTE + + +S +Y++F++G
Sbjct: 113 VEYLLVTVLNNLSSMRVNEQLDISSTHYLDINHADIVARIDLTEWETNPESTRYLTFLKG 172

Query: 181 RAGRKVADFFLDFMGCVEGVNTKAQNKTLMNAVEDFVASSDLTKEERQQCRNKVFEYCSE 240
           R GRKVADFF+DF+G  EG+N KAQNK L+ AV+DF A + L K ERQ  R +V+ YC+E
Sbjct: 173 RVGRKVADFFMDFLGASEGLNAKAQNKGLLQAVDDFTAEAQLDKSERQTVRQQVYSYCNE 232

Query: 241 RFDEGADIEIKDLADELADQGMESFYDFARGGSYELDEEFPADKSTLRQLKKFSGTGGGV 300
           +   G +IE++ L+ ELA     SF +F     YEL+E FPAD+STLRQL KF+G+GGG+
Sbjct: 233 QLQAGEEIELESLSKELAGVSEVSFQEFTADKGYELEESFPADRSTLRQLTKFAGSGGGL 292

Query: 301 TISFDGGHLGQRVIYDPISDTILIKGVPANLKDQLDRRLKG 341
           TI+FD   LG+R+ +DP +DT+ IKG P NL DQL RR  G
Sbjct: 293 TINFDAMLLGERIFWDPATDTLTIKGTPPNLHDQLQRRTSG 333