Pairwise Alignments

Query, 596 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 584 a.a., DUF3413 domain-containing protein from Pantoea sp. MT58

 Score =  300 bits (768), Expect = 1e-85
 Identities = 192/605 (31%), Positives = 309/605 (51%), Gaps = 47/605 (7%)

Query: 6   KQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIGQFSFL 65
           +Q  R++VS++I+WGHWFA FN L A+I+G+RYL    +P +  G  Y   S +G FSF+
Sbjct: 5   RQRYREKVSQMISWGHWFALFNILFALILGSRYLLVADWPSSLAGRIYAYTSWVGHFSFV 64

Query: 66  AFIAYLICLFPLTLILPYSKILRGLAAVIATLSLCLLLYDTIVYADYGMHLSPFAFDIAW 125
            F AYL+ +FPLT ++   +++R L+AV+AT  L L++ D+ V++ + +HL+P  +++  
Sbjct: 65  VFAAYLLIIFPLTFVVMSQRLMRVLSAVVATAGLTLIMVDSAVFSRFHLHLNPVVWELVI 124

Query: 126 -ADLSALLHG--TSYIVTPIAILAIELTAANFLWKRIEKIQKLNLGNKVIAFVGVCFVSS 182
             D S +       +I  P+ I  +E+  A + W+++  + + + G  V A     F +S
Sbjct: 125 NPDQSEMARDWQLMFISVPL-IFLVEMLFATWSWQKLRSLNRRSFGKPVAALFISAFFAS 183

Query: 183 HLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQINDEATQASN----TL 238
           HL++IWADA     IT      PLSYP TAR F+E HG+  + +      Q  +     +
Sbjct: 184 HLMYIWADANFYRPITMQRANLPLSYPMTARRFLERHGLLDAQEYQRRLIQQGDPEAVAV 243

Query: 239 SYPIQPLQCQ-ADSKSNVLMLTIDSLRADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQFK 297
            YP+  +  + A +++N+L+LT+D L  +   AK +P L+Q+  +N  FTQHYS G+  +
Sbjct: 244 EYPLSDITFRDAGTRNNLLVLTVDGLN-NATLAKALPQLNQFASENVRFTQHYSAGDTPE 302

Query: 298 TGMFSLLYGLQGSYGDARIFNNTSPLMIRSFKQAGYELGLFIPETNLNLRSAQAMFNDFT 357
            G+F L YG+  SY +  + + T   ++ +    GY+ GLF  E        QA+  D++
Sbjct: 303 KGLFGLFYGISSSYMNGILASRTPSALLGALSTQGYQFGLFSSEGFNPPLYRQALLTDYS 362

Query: 358 -PVIAEETNGSAEADILSVGHFKQW---QSAQQRPWFALVNLKAPENFDTPVGFLGIETV 413
            P    + N S      +V  ++ W   Q A Q PWF+ + L  P+             V
Sbjct: 363 LPATTSQPNAS------TVAQWQNWLEKQKASQAPWFSWIALNGPD-------------V 403

Query: 414 KADPNLKPAQKVLFNQYRQSLNFIDKQIQAIVSELPS-----DTLVVITGVNGKIFTSNS 468
             D N K  Q+     Y +    +D+QI A++S L +     +T+VVIT   G     + 
Sbjct: 404 TGD-NSKARQR----SYLRQAPAVDEQISAVLSSLQARDLLKNTVVVITAQRGLALDGDP 458

Query: 469 DEALRNLSPESVRVPLVIHWPNALASKVNYRTSHYGVVPTLMTHVLGCTNNTSDYSAGRS 528
           D A      ++++VPLVIHWP+  A  V+  + H  V+ TLM  +L    N  +YS G  
Sbjct: 459 DSAGNR---QTLQVPLVIHWPDTPAQTVDRLSDHQDVMATLMQRLLHVRTNPVNYSQGED 515

Query: 529 LLQP-SKETWIYIGDSRIFAIYQQSEITVIDRHGKYRIYDENFEHRLHKKMSAPELIQVL 587
           L     +  W+   +     I       V++ +G YR YD         K     L+QVL
Sbjct: 516 LFAARRRHDWVASSEENKLVITTPQVTLVLNNNGSYRAYDAQGNALKDHKPELALLLQVL 575

Query: 588 REGRR 592
            E +R
Sbjct: 576 TEEKR 580