Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 332 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  119 bits (298), Expect = 1e-31
 Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 19/195 (9%)

Query: 116 IEIATDITDRKQMEEALIEAKSTAERLANTDELTKLYNRRAFFN---LGLSIAQQSGQAL 172
           + IA DIT++KQ+E  L       +RLA TD LT+  NRR FF    +    A+Q   +L
Sbjct: 150 VGIAEDITEKKQLEGEL-------QRLATTDVLTQSSNRRHFFECARIEFERARQFASSL 202

Query: 173 AFIMFDIDRFKHVNDRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHH 232
           AF++ DID FK +ND  GH  GD  L  +A+   ++L+  D+ GR+GGEEF  +LP    
Sbjct: 203 AFLLLDIDDFKRINDTHGHQMGDQVLQKVARCGASVLRQSDLFGRIGGEEFAAVLPGCQP 262

Query: 233 EQACQLAESIRCRFEEQPL-ALNGQIIKCTASFGIASITIPVIHSEKEAQNLLETLFNSA 291
           + A Q+AE ++   E     A NG+  + TAS G+  +         +A+  L T+F  A
Sbjct: 263 DLAEQIAERLQREIERVVFTAENGERFRVTASLGLTYL------RANDAE--LSTVFARA 314

Query: 292 DQAMMQAKRNGRNQV 306
           D AM  AKR G+NQV
Sbjct: 315 DAAMYTAKRLGKNQV 329