Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 319 a.a., response regulator receiver protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (276), Expect = 3e-29
 Identities = 74/205 (36%), Positives = 103/205 (50%), Gaps = 12/205 (5%)

Query: 111 GRLVRIEIAT-DITDRKQMEEALIEAKSTAERLANTDELTKLYNRRAF---FNLGLSIAQ 166
           G++  I I   D+TD    +  L  A    E L+ TD LT+L+NRR +    N       
Sbjct: 123 GQITHISIIVYDVTDVAVNKLQLKNANERLEHLSQTDGLTQLHNRRHWQECMNREYERFN 182

Query: 167 QSGQALAFIMFDIDRFKHVNDRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGIL 226
           + G  ++ +MFDIDRFK VND  GH  GD  + HIA L    L+  D  GR GGEEF ++
Sbjct: 183 RYGDPVSLVMFDIDRFKQVNDEHGHVAGDKVIQHIAHLLSQSLRETDCAGRYGGEEFAVV 242

Query: 227 LPDLHHEQACQLAESIRCRFEEQPLALNGQIIKCTASFGIASITIPVIHSEKEAQNLLET 286
           L     E+A    E +R +     +   G+ I+ T S GI  +   V   + E+Q L   
Sbjct: 243 LTGTTAEEAYHFTERLREKVASSAIQFGGKSIQVTISLGICGMDDFV---DNESQWLA-- 297

Query: 287 LFNSADQAMMQAKRNGRNQVCSATE 311
               ADQA+ QAK+ GRN+    +E
Sbjct: 298 ---CADQALYQAKQQGRNRTVIYSE 319