Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 519 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score =  106 bits (264), Expect = 1e-27
 Identities = 76/213 (35%), Positives = 113/213 (53%), Gaps = 26/213 (12%)

Query: 110 DGRLVRIEIATDITDRKQMEEALIEAKSTAERLANTDELTKLYNRRAFFNLGL---SIAQ 166
           DG+   +    DIT  KQ EEA        +RLA TD LT L NRR  F+ G+   + A+
Sbjct: 325 DGQPAVLLSFNDITVHKQREEAW-------QRLALTDPLTGLGNRRLLFDRGILEVARAR 377

Query: 167 QSGQALAFIMFDIDRFKHVNDRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGIL 226
           +    L+ +M D+D FK +ND  GH  GDA L  +A   +  L+ +D++ R+GGEEF IL
Sbjct: 378 RGCWPLSGLMIDLDHFKRINDTQGHAAGDAILRTLADTLRESLREIDVIARVGGEEFAIL 437

Query: 227 LPDLHHEQACQLAESIRCRFEEQPLALNGQIIKCTASFGIASITIPVIHSEKEAQNLLET 286
           LPD     A ++ E +R         L+ QI +        S+ I  +H E      L  
Sbjct: 438 LPDTSLTAAHEVGERLR---------LSCQIPQPVGGPVTISVGISTLHPEDRG---LGD 485

Query: 287 LFNSADQAMMQAKRNGRNQVCSATELANFAQNN 319
           + + AD A+ +AKRNGR++V    E+A+ +++N
Sbjct: 486 MLSRADDALYRAKRNGRDRV----EIADDSEDN 514