Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 429 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  115 bits (287), Expect = 2e-30
 Identities = 69/189 (36%), Positives = 98/189 (51%), Gaps = 18/189 (9%)

Query: 121 DITDRKQMEEALIEAKSTAERLANTDELTKLYNRRAFFNLG---LSIAQQSGQALAFIMF 177
           DIT  KQ+E+ L        +LA TD LT L NR++F  L    ++   ++G   + +M 
Sbjct: 253 DITQAKQLEDEL-------RQLATTDALTGLCNRQSFLRLADQEMARFNRAGNPASVLML 305

Query: 178 DIDRFKHVNDRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHHEQACQ 237
           D+D FKH+ND +GH  GDA L   ++ T  +L+ VD+ GR+GGEEF IL PD   +    
Sbjct: 306 DLDYFKHINDTYGHGVGDAVLRDFSRRTGILLRQVDLFGRIGGEEFCILSPDTDQDGGLA 365

Query: 238 LAESIRCRFEEQPLALNGQIIKCTASFGIASITIPVIHSEKEAQNLLETLFNSADQAMMQ 297
           L + +      QP   NG  I  T S G+           +      + +   AD A+ Q
Sbjct: 366 LGQRLCQTIAGQPAHCNGLTIAYTVSIGVTGF--------RAGDPNFDAVLARADSALYQ 417

Query: 298 AKRNGRNQV 306
           AKR+GRNQV
Sbjct: 418 AKRHGRNQV 426