Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 569 a.a., diguanylate cyclase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  107 bits (268), Expect = 5e-28
 Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 130 EALIEAKSTAERLANTDELTKLYNRRAF---FNLGLSIAQQSGQALAFIMFDIDRFKHVN 186
           +AL        R+A  D LT  +NRR      N  L+ + +SG  LA  M D+D FK VN
Sbjct: 369 QALTRLNEELRRIAERDHLTGCFNRRRLDEAMNAELARSARSGHPLALAMLDLDHFKAVN 428

Query: 187 DRWGHTTGDAALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHHEQACQLAESIRCRF 246
           D+ GH  GDA L H+ ++ +  L+  D+L R+GGEEF +LLPD    +A  L E +R + 
Sbjct: 429 DQHGHGVGDAMLAHVTEIIRNQLREPDLLARVGGEEFALLLPDTGEREAVTLLERVRRKV 488

Query: 247 EEQPLALNGQIIKCTASFGIASITIPVIHSEKEAQNLLETLFNSADQAMMQAKRNGRNQV 306
           +E PL      I  T S G+A  + P I   +          + AD A+  AKR GRN+ 
Sbjct: 489 QETPLPHADGPIPMTVSAGVAE-SRPDIEPGR--------WMHVADAALYMAKRCGRNRT 539

Query: 307 CSATEL 312
             A ++
Sbjct: 540 VRAAQV 545