Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 552 a.a., diguanylate cyclase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  110 bits (274), Expect = 1e-28
 Identities = 66/170 (38%), Positives = 92/170 (54%), Gaps = 7/170 (4%)

Query: 140 ERLANTDELTKLYNRRAFFNLG---LSIAQQSGQALAFIMFDIDRFKHVNDRWGHTTGDA 196
           ERL+ TDELT L NRR   + G   +SI +++GQ  A +M D+D FKH+ND  GH TGD 
Sbjct: 351 ERLSGTDELTGLANRRLLADAGARIVSICRRAGQPCACLMLDLDHFKHINDVHGHATGDE 410

Query: 197 ALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHHEQACQLAESIRCRFEEQPLALNGQ 256
            L  +A    A ++  D   R+GGEEF I+ P+     A  LAE +R   E   L     
Sbjct: 411 VLRRLAAAIMATVRSSDFAVRMGGEEFAIIAPNTDATHAMALAERLRRNVERIDLRQADM 470

Query: 257 IIKCTASFGIASITIPVIHSEKEAQNLLETLFNSADQAMMQAKRNGRNQV 306
            +    S G+A +T+    + +     LE L   AD A+ +AK+ GRN+V
Sbjct: 471 PVPVAISVGVAGMTV----TPRYGAGPLEDLLARADHALYRAKQAGRNRV 516