Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  114 bits (286), Expect = 5e-30
 Identities = 81/217 (37%), Positives = 117/217 (53%), Gaps = 21/217 (9%)

Query: 104 QAIRWTDGRLVRIEIATDITDRKQMEEALIEAKSTAERL----------ANTDELTKLYN 153
           Q IR      +++E  T+    + ++E  +E + T   L          +  D LT + N
Sbjct: 405 QKIRSAREEALKVEAETNERLEQMVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVKN 464

Query: 154 RRAFFNLGLS---IAQQSGQALAFIMFDIDRFKHVNDRWGHTTGDAALIHIAKLTQAILK 210
           R AF    L+   I+++    +A +M DIDRFK +ND++GH  GD AL  IA   Q  LK
Sbjct: 465 RSAFDKRLLAESRISRRQETPIALLMLDIDRFKSINDQFGHLAGDQALKVIATTLQQHLK 524

Query: 211 -PVDILGRLGGEEFGILLPDLHHEQACQLAESIRCRFEEQPLALNGQIIKCTASFGIASI 269
            P D++ R GGEEF I+LP+   E A Q+AESIR       LA  G+ I  T S G+++ 
Sbjct: 525 RPTDLVSRFGGEEFAIILPNTTAEGAIQVAESIRDAVTSIGLAWEGKPIPLTVSIGVSA- 583

Query: 270 TIPVIHSEKEAQNLLETLFNSADQAMMQAKRNGRNQV 306
              VI +++ +  LLE     AD+A+ QAK +GRNQV
Sbjct: 584 --DVISNDQHSTELLE----QADKALYQAKNSGRNQV 614