Pairwise Alignments

Query, 320 a.a., cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 329 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  458 bits (1179), Expect = e-134
 Identities = 223/297 (75%), Positives = 251/297 (84%)

Query: 13  EAIHTILNSLDALVYVSDLHTYELLYLNDYGTTIWGEPTGKKCYQLLQAGQNSPCSFCTN 72
           +AI TILNSLDALVYVSDL TY+LLYLNDYG ++WGE  GKKCYQ+LQ+ Q+SPC FCTN
Sbjct: 32  QAIDTILNSLDALVYVSDLDTYDLLYLNDYGVSVWGEAKGKKCYQVLQSAQHSPCQFCTN 91

Query: 73  HKLINHAGNSTTVHVWEFKNTYNNRWYQCRDQAIRWTDGRLVRIEIATDITDRKQMEEAL 132
            KL++  GN   VHVWEF+NT N RWYQCRDQAI WTDGRLVRIEIATDIT+RKQME+AL
Sbjct: 92  PKLLDEKGNPAGVHVWEFQNTQNGRWYQCRDQAIHWTDGRLVRIEIATDITERKQMEQAL 151

Query: 133 IEAKSTAERLANTDELTKLYNRRAFFNLGLSIAQQSGQALAFIMFDIDRFKHVNDRWGHT 192
           IEAKSTAERLA+TDELT+LYNRRAFFNLG  IAQQ+ Q LAFIMFDID FK +NDRWGH 
Sbjct: 152 IEAKSTAERLADTDELTQLYNRRAFFNLGRQIAQQTAQPLAFIMFDIDHFKRINDRWGHA 211

Query: 193 TGDAALIHIAKLTQAILKPVDILGRLGGEEFGILLPDLHHEQACQLAESIRCRFEEQPLA 252
            GDAALIHIA+LTQ  L+  DIL RLGGEEFG++LP+ HHEQA Q+AESIR  F+ QPL 
Sbjct: 212 MGDAALIHIARLTQTKLRTNDILARLGGEEFGLILPNTHHEQAWQVAESIRHGFDTQPLQ 271

Query: 253 LNGQIIKCTASFGIASITIPVIHSEKEAQNLLETLFNSADQAMMQAKRNGRNQVCSA 309
           LNG  I CTASFGI+S+ +P I+   EAQ LLETLFN+ADQAMMQAKR GRNQVC A
Sbjct: 272 LNGHSIHCTASFGISSLVLPQINHPDEAQTLLETLFNNADQAMMQAKRAGRNQVCDA 328