Pairwise Alignments

Query, 544 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  110 bits (276), Expect = 6e-29
 Identities = 71/208 (34%), Positives = 104/208 (50%), Gaps = 10/208 (4%)

Query: 337 DTMQNKVSIIQAGSDDLISKQTAPSLFVTQVISRAQRGHDIRSS-------ASRDSLTGL 389
           D M   V+++   S  L  K T  S+ +  V   A     ++++       +  D LT L
Sbjct: 107 DFMYQNVTLLPLAS--LTGKITHISVIIYDVTDIAVNKLQLKAANEQLERLSQTDGLTQL 164

Query: 390 LNHTQILVAARHCINLAKRANSSVCIAMLDLDHFKQVNDTYGHSGGDKVLLAFAHLLQQS 449
            N         H  +L  R +    + M+D+DHFK++NDTYGH  GDKV+   AH+L  S
Sbjct: 165 HNRRHWQQCLEHEFDLHARYSGMSSLVMIDIDHFKRINDTYGHVAGDKVIQHIAHILSHS 224

Query: 450 LRAADFMGRYGGEEFMLVIPDMPAPLVIAKVNAIRESFSNIVFVEEGAEFKVTLSGGLA- 508
           LR  D +GRYGGEEF +V+P+      +     +RE  ++   V EG + KVT+S G+  
Sbjct: 225 LRETDCVGRYGGEEFAVVMPNTCGADALNFTERLRERIADSTIVYEGLKIKVTVSLGVCE 284

Query: 509 FSTECHEFQECLLLADKNLYEAKRTGRN 536
                      +  +DK LYEAK+ GRN
Sbjct: 285 IGKHITSSSGWISCSDKALYEAKQKGRN 312