Pairwise Alignments

Query, 702 a.a., chemotaxis protein CheA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 711 a.a., chemotaxis protein CheA from Phaeobacter inhibens DSM 17395

 Score =  374 bits (960), Expect = e-108
 Identities = 259/711 (36%), Positives = 386/711 (54%), Gaps = 56/711 (7%)

Query: 12  FFEESHEHLENMEQLLIAINLQSPDPEELNTIFRAAHSIKGGSGIFGFTALSSVTHVMEN 71
           FFEE  E LE M++ L AI     DPE +N +FRA HSIKGG+G FG   L +  H  E 
Sbjct: 9   FFEECEELLEAMDEGLTAIEGGDHDPEVVNAVFRAVHSIKGGAGAFGLDELVAFAHKFET 68

Query: 72  LLDKVRKGTFELSSGIIDLLLKTVDTLSHILSLYREEEPIDWQQVEFAKNQLVAALNGDP 131
           + D+VR    +L + +I LLL+  D LS +++  R+   +D    E   + LV+AL  + 
Sbjct: 69  VFDEVRANRLQLDTKLIQLLLRCSDHLSDLVATSRDGGSVD----EAHNDVLVSAL--EE 122

Query: 132 FLTTSPEAIPATP---------TKTEITQTAV-VVSDASHQDDIGFGFFEDDVELTLAIE 181
           ++    E +   P            E+ Q  V  +     +D  G G     +  TLA  
Sbjct: 123 YIDEEEEEVVFQPMGLGGAFEMAAIEVEQERVYTIRFHPLKDMYGTGNEPYFLFQTLA-- 180

Query: 182 NQDFGFFDEAFTAKEISVEDINKT----LLDSQLVTNTEPDDDLG--FGFFESLTPESVD 235
             D G  +      E+   D   T    L+ +  +T TEP   +   F F E L   S+D
Sbjct: 181 --DLGTLEVTLDESELPGFDALDTDESYLIWALTLTTTEPKSAIESVFEFVEGLCELSID 238

Query: 236 SEI------NALVHIQANKAIAAIEPLSKPVNSPSVPKIPRYTGNTAESTKVAPADPVDP 289
           S++      NAL  ++A    AA E     V +P  P +             AP      
Sbjct: 239 SDMDEEDDANALAALEAAFG-AAPEEGGDQVTAPFEPPVS------------APEPEAVE 285

Query: 290 SPVLNKSVASGTKSTPTAATKKGNTSTQDATLRVETSKIDTLVNLAGELVITQSMLTL-I 348
           +PV  K+ A      P A   K      + TLRV+  ++D L+N  GEL+I  SML   I
Sbjct: 286 APVAAKAAA------PKAEAAKSEQRGPNPTLRVDLERVDRLINAVGELIINHSMLAQQI 339

Query: 349 GNEISGELGERLKTALVELERNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSDQLGKNV 408
            N    +L + ++T L   +   R++QE VMS+R  PV  +F R  R+VR+ S   GK  
Sbjct: 340 ANLDVADLRD-VETELEGFKNLARDIQEGVMSIRAQPVKPLFQRMARIVREASSATGKTA 398

Query: 409 NLVIEGGNTEIDKGMIEKLVDPLTHLVRNSLDHGIEKPEVRRLLGKAEIAQLSLRASQRG 468
            L+ EG  TE+DK +IE+L DPLTH++RN++DHGIEKPE R   GK +  ++ L AS R 
Sbjct: 399 KLITEGEGTEVDKTVIERLSDPLTHILRNAVDHGIEKPEDREAAGKTKSGEIRLSASHRS 458

Query: 469 GNIVIAVHDDGAGLHREKILQKARENNMSVTD-NMPDKQIWQLIFAAGFSTAKEITDVSG 527
           G++ I + DDGAG++R ++ Q A +  +   + ++ D +I  L+F  GFSTAKEI+++SG
Sbjct: 459 GSVCIEIKDDGAGVNRPRVKQIAIDKGLIPENADLSDSEIDNLLFLPGFSTAKEISNLSG 518

Query: 528 RGVGMDVVRRNIEALGGRIDIDSVAGQGATFEIQLPLTLAIVDGMSVSVGKQIYILPLVH 587
           RGVGMDVV+  + ALGGRI+I S  G+G+ F I LPLTLA++DGM VSV  Q  ++P+  
Sbjct: 519 RGVGMDVVKNAVTALGGRINIASTPGKGSVFTIILPLTLAVMDGMVVSVADQTMVVPITS 578

Query: 588 IIESIQPHTEQLKYL-AQERLIRVREEYLPLLNLHQLMEITPFAKCPEEGIVVLLES-NN 645
           I+E+++   + +  L A   L+ +R  ++P+ ++   + ++   +    G+ +L+E+   
Sbjct: 579 IVETMRGSDDMVNNLGADGTLLSIRGNFVPVCDVGGALGLSKADQDQPPGVYLLVETETG 638

Query: 646 KRFGLCVDALVGQQQVVIKSLEKHYRRIPGVSGATIMGDGSVALILDVESL 696
           +R  L VD +  Q+QVVIKSL+     IPGV+ ATI+GDG +A+ILD ES+
Sbjct: 639 QRSALAVDDIHDQRQVVIKSLDGVCGNIPGVAAATILGDGKIAMILDPESI 689