Pairwise Alignments

Query, 702 a.a., chemotaxis protein CheA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 819 a.a., chemotaxis protein histidine kinase-like protein from Dechlorosoma suillum PS

 Score =  529 bits (1362), Expect = e-154
 Identities = 332/815 (40%), Positives = 456/815 (55%), Gaps = 118/815 (14%)

Query: 1   MSINMAEFHQVFFEESHEHLENMEQLLIAINLQSPDPEELNTIFRAAHSIKGGSGIFGFT 60
           M+I+M++F+QVFFEES EHL  ME LL+ +++ +P+ E+LN IFRAAHSIKG SG FGFT
Sbjct: 1   MAIDMSQFYQVFFEESAEHLAEMESLLLGLDVGAPEDEDLNAIFRAAHSIKGSSGTFGFT 60

Query: 61  ALSSVTHVMENLLDKVRKGTFELSSGIIDLLLKTVDTLSHILSLYREEEPIDWQQVEF-- 118
            L++VTHV+E LLD++RK    L   ++D  L+  D L  +L+ ++  E +  +  E   
Sbjct: 61  DLTAVTHVLETLLDRLRKHEIGLRPEMVDAFLEAGDLLKLLLAAHQGGEAVSAEAQEAIC 120

Query: 119 -AKNQLVAALNGDPFLTTSPEAIPA----------------TPTKTEITQTAV-VVSDAS 160
               QL      +P     PEA+ A                TP    + +T    + D  
Sbjct: 121 EKLRQLSRDEGAEPVAVVMPEAVVAPADSGVDGGWEIEFVPTPASLAVPETLENFLEDLG 180

Query: 161 HQ-------------------------------DDIGFGFFEDDVELT-----LAIENQD 184
            Q                               D + F    D   L+      A  ++ 
Sbjct: 181 RQGRLEVLSRSSGPVPSLWQLRLYGQVAREALADSLDFVAETDAWRLSPLAAPAAAADEA 240

Query: 185 FGFFDEAFTAKEISVE----DINKTLLDSQLVTNTEPDDDLGFGFFESLTPESVDSEINA 240
           FG FD+A  A +        D    L  +      E  D  G+GFF+ L PE V +E +A
Sbjct: 241 FGLFDDAPGAPQDEAAYGFFDDAPGLAPAAPAAMAEEGD--GYGFFDPL-PEPVVAE-DA 296

Query: 241 LVHIQA----NKAIAAIEPLSKPVNSPSV-----------PKIPRYTGNTA--------- 276
           L  I A     +      PL  P  +P+              +P   G  A         
Sbjct: 297 LAPIPAVAEEGEGYGFFAPLPDPAAAPAAVAEEGDGYGFFEPLPANVGAAAGVAESPVLE 356

Query: 277 ------------ESTKVAPADPVDPSPVLNKSVASGTKSTPTAAT--------------- 309
                       ++  + P     P+P+ +   A        AA                
Sbjct: 357 EGEGYGFFVPLPQAGTMPPVSEPAPAPLASPQTAPAVVPASVAAAAPALVAPAAEARVES 416

Query: 310 --KKGNTSTQDATLRVETSKIDTLVNLAGELVITQSMLTLIGNEISGELGERLKTALVEL 367
             K    +  D+++RV   K+D L+NL GELVITQ+ML     E+     ERL   L +L
Sbjct: 417 RPKAPPVAAGDSSIRVGVEKVDQLINLVGELVITQAMLLATAQEMQEAAPERLLNGLTQL 476

Query: 368 ERNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSDQLGKNVNLVIEGGNTEIDKGMIEKL 427
           ERN+R++QEAVMS+RMLP+SFVF+RF R+VRDLS +LGK V L + G  TE+DKG+IEK+
Sbjct: 477 ERNSRDLQEAVMSIRMLPISFVFSRFPRVVRDLSGKLGKQVELKMSGETTELDKGLIEKI 536

Query: 428 VDPLTHLVRNSLDHGIEKPEVRRLLGKAEIAQLSLRASQRGGNIVIAVHDDGAGLHREKI 487
            DPLTHL+RNSLDHGIE PE R   GK     ++L+A+ +GGNIVI V DDGAGL+R+KI
Sbjct: 537 TDPLTHLIRNSLDHGIESPEKRVAAGKPPGGTITLKAAHQGGNIVIEVGDDGAGLNRQKI 596

Query: 488 LQKARENNMSVTDNMPDKQIWQLIFAAGFSTAKEITDVSGRGVGMDVVRRNIEALGGRID 547
           L KARE  ++ +D M D+ +W LIF  GFSTA ++TDVSGRGVGMDVVRRNI+ALGGRI+
Sbjct: 597 LAKAREKGLAASDQMSDQDVWALIFEPGFSTADQVTDVSGRGVGMDVVRRNIQALGGRIE 656

Query: 548 IDSVAGQGATFEIQLPLTLAIVDGMSVSVGKQIYILPLVHIIESIQPHTEQLKYLA-QER 606
           I+S+ G G    ++LPLTLAI+DGMSV+VG++IYI+PL +++ES+QP    +K ++ Q R
Sbjct: 657 IESMTGIGTRMTVRLPLTLAILDGMSVAVGEEIYIIPLSYVVESLQPKPSDIKTVSNQGR 716

Query: 607 LIRVREEYLPLLNLHQLMEITPFAKCPEEGIVVLLESNNKRFGLCVDALVGQQQVVIKSL 666
           +I+VR EYLP++ LH++    P  +   +GI+V+L ++  +  L VD LVGQ QVVIKSL
Sbjct: 717 VIQVRGEYLPVVVLHEVFAAEPKVREFHQGIMVVLNADGAKAALFVDGLVGQHQVVIKSL 776

Query: 667 EKHYRRIPGVSGATIMGDGSVALILDVESLAQQIK 701
           E++YR++ GVSGATIMGDG VALILD  +L    K
Sbjct: 777 EQNYRKVQGVSGATIMGDGRVALILDTSALVAMAK 811