Pairwise Alignments

Query, 702 a.a., chemotaxis protein CheA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 744 a.a., chemotaxis protein histidine kinase-like protein from Dechlorosoma suillum PS

 Score =  299 bits (765), Expect = 4e-85
 Identities = 163/381 (42%), Positives = 246/381 (64%), Gaps = 11/381 (2%)

Query: 321 LRVETSKIDTLVNLAGELVITQSMLTLIGNEISGELGERLKTALVELERNTREMQEAVMS 380
           +R++  K+D L++L GELVI  +   L+ +     L + L  A   L R   +++++ + 
Sbjct: 348 IRIQADKLDRLIDLVGELVIAGASTNLLASRAG--LSD-LNEATSLLNRLVEQIRDSALQ 404

Query: 381 VRMLPVSFVFNRFHRLVRDLSDQLGKNVNLVIEGGNTEIDKGMIEKLVDPLTHLVRNSLD 440
           +RM+ +   FNRF R+VRD+S +LGK++ L I GG TE+DK ++EK+ DPL HLVRN++D
Sbjct: 405 LRMVQIGETFNRFQRVVRDVSKELGKDIELTIAGGETELDKSVVEKIGDPLMHLVRNAMD 464

Query: 441 HGIEKPEVRRLLGKAEIAQLSLRASQRGGNIVIAVHDDGAGLHREKILQKARENNM-SVT 499
           HGIE  EVR+  GK+   +LSL A    G+IVI V DDG GL+R+KIL+KA E  +    
Sbjct: 465 HGIESAEVRQAKGKSPRGRLSLNAYHDSGSIVIDVADDGGGLNRDKILKKAVEKGLVQAG 524

Query: 500 DNMPDKQIWQLIFAAGFSTAKEITDVSGRGVGMDVVRRNIEALGGRIDIDSVAGQGATFE 559
            ++ D++I  LIF  GFST  +++++SGRGVGMDVV+RNI+ L GR+++ S  G G  F 
Sbjct: 525 VHLSDQEIANLIFEPGFSTVDKVSNLSGRGVGMDVVKRNIQGLRGRVEVHSEEGHGTRFS 584

Query: 560 IQLPLTLAIVDGMSVSVGKQIYILPLVHIIE--SIQPHTEQLKYLAQERLIRVREEYLPL 617
           I+LPLTLAI+DG  V   +  Y++PL  ++E   +Q H        +   + +R E LP 
Sbjct: 585 IRLPLTLAIIDGFLVGADRASYVIPLDMVVECLELQAHATS---SGERNYLNLRGEVLPF 641

Query: 618 LNLHQLMEITPFAKCPEEGIVVLLESNNKRFGLCVDALVGQQQVVIKSLEKHYRRIPGVS 677
           + L  L EI    + P+   VV++++  ++ G+ VD L+G+ Q VIK L + +R + G+ 
Sbjct: 642 IRLRDLFEIP--GEPPKRENVVVVKAAGQKAGIVVDTLLGEFQTVIKPLGQLFRHLRGIG 699

Query: 678 GATIMGDGSVALILDVESLAQ 698
           G+TI+G G VALILDV++LAQ
Sbjct: 700 GSTILGSGDVALILDVQALAQ 720



 Score = 79.0 bits (193), Expect = 8e-19
 Identities = 39/100 (39%), Positives = 60/100 (60%)

Query: 5   MAEFHQVFFEESHEHLENMEQLLIAINLQSPDPEELNTIFRAAHSIKGGSGIFGFTALSS 64
           M E   VF  ES E L  ME+ L+ +     D + +N +FR AH+IKGG+G+     + +
Sbjct: 1   MDELTTVFVTESREQLAAMEEALLQLEANPEDSDLINAVFRPAHTIKGGAGVIECNFIVA 60

Query: 65  VTHVMENLLDKVRKGTFELSSGIIDLLLKTVDTLSHILSL 104
            THV EN LDK+R G  ++SS ++ +LL   D + ++LS+
Sbjct: 61  FTHVAENALDKLRNGDIKVSSDLVAVLLGCCDHIGNLLSV 100