Pairwise Alignments

Query, 702 a.a., chemotaxis protein CheA (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 708 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  384 bits (987), Expect = e-111
 Identities = 254/704 (36%), Positives = 384/704 (54%), Gaps = 31/704 (4%)

Query: 10  QVFFEESHEHLENMEQLLIAINLQSPDPEELNTIFRAAHSIKGGSGIFGFTALSSVTHVM 69
           Q F EE+ + L  +E  L+ I  +  D   ++ IFRA H+IKG   +FGF  ++S TH +
Sbjct: 10  QAFVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFDDIASFTHDV 69

Query: 70  ENLLDKVRKGTFELSSGIIDLLLKTVDTLSHILSLYREEEPIDWQQVEFAKNQLVAALNG 129
           E++ DKVR G  ELS  ++DL LK+ D ++++L    +   +D          L A L G
Sbjct: 70  ESVFDKVRNGEMELSPELLDLTLKSRDHIAYLLQCATKGLAVDVSMSADLTQALRALLPG 129

Query: 130 DPFLTTSPEAIPATPTKTEITQTAVVVSDASHQDDIGFGFFEDDVELTLAIENQDFG--- 186
           D   + SP     +  + E  +    V    H       F      L L  E QD G   
Sbjct: 130 DDHASASPADEMPSSGEVEGPRRTYRVRFKPHPQL----FLSGTNPLGLVREIQDLGRSK 185

Query: 187 ---FFDEAFTAKEISVEDINKTLLDSQLVTNTEPD---DDLGFGFFESLTPESVDSEINA 240
               F +     E+  E  +    D  L T+++     D   F   ++     +  E N 
Sbjct: 186 LFVHFGDVPALDELDPEQCH-VWWDVLLTTDSDEAAIRDIFLFVEDDATVDVRLIDEANL 244

Query: 241 LVHIQANKAIAAIEPLSKPVNSPSVPKI---PRYTGNTAESTKVAPADPVDPSPVLNKSV 297
           L    A K +  I      V +  + ++    R  G       +   D V  +    K+V
Sbjct: 245 LEQDGAYKRLGEILLERGDVATEDLRRVLEEQRPIGELLAEAGIVTPDQVASALAEQKTV 304

Query: 298 A----SGTKSTPTAATKKGNTSTQDATLRVETSKIDTLVNLAGELVITQSMLTLIGNEIS 353
                S T+     A K G+     A++RV  +K+D LV+L GELVI QS +  + +E  
Sbjct: 305 RELRRSRTEDGDKPAEKAGDAG---ASIRVSAAKLDYLVDLVGELVIVQSQIARMAHE-- 359

Query: 354 GELGERLKTALVELERNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSDQLGKNVNLVIE 413
                 + + +  LER + ++++  + VRMLP+   F+RF RLVRDL+ +LGK+V LV  
Sbjct: 360 -HPAPGMLSLVEALERLSDDLRDTTLGVRMLPIGTTFSRFRRLVRDLAGELGKSVELVTL 418

Query: 414 GGNTEIDKGMIEKLVDPLTHLVRNSLDHGIEKPEVRRLLGKAEIAQLSLRASQRGGNIVI 473
           GG TE+DK +IE+L DPL H +RNSLDHG+E PE R   GK+   +++L A+  GG +++
Sbjct: 419 GGETELDKTVIERLGDPLVHCLRNSLDHGVESPERRLAAGKSATGRITLAAAHAGGEVLV 478

Query: 474 AVHDDGAGLHREKILQKA-RENNMSVTDNMPDKQIWQLIFAAGFSTAKEITDVSGRGVGM 532
            + DDGAG+  E+I Q A R+  ++   ++  +Q  +LIFAAGFSTA+++T VSGRGVGM
Sbjct: 479 TISDDGAGIDAERIYQAALRKGIIAPEVDLSTRQKLELIFAAGFSTAEKVTSVSGRGVGM 538

Query: 533 DVVRRNIEALGGRIDIDSVAGQGATFEIQLPLTLAIVDGMSVSVGKQIYILPLVHIIESI 592
           DVV+R IE+L GRI+++S  G+G    I+LPLTLAI+DG+ V VG + YI+PL H+ E  
Sbjct: 539 DVVKRAIESLRGRIELESTPGKGTVITIRLPLTLAIIDGLQVRVGDESYIIPLPHVEECA 598

Query: 593 QPHTEQLKYLAQERLIRVREEYLPLLNLHQLMEITPFAKCPEEGIVVLLESNNKRFGLCV 652
           + +T       ++R+I +R + +P + L  +  +   +   E+  +V++ +   RFGL V
Sbjct: 599 EHNTPD-HVDGRQRIINLRGDIVPFIRLRDVFRVPGVSPGMEQ--LVVVNALGSRFGLVV 655

Query: 653 DALVGQQQVVIKSLEKHYRRIPGVSGATIMGDGSVALILDVESL 696
           D ++G+ Q VIKSL K Y+ IPG+SGATI GDGS+ALI+DV  L
Sbjct: 656 DCVIGEHQTVIKSLGKVYKDIPGISGATIQGDGSMALIIDVPGL 699