Pairwise Alignments

Query, 476 a.a., sensor protein YgiY, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 456 a.a., signal transduction histidine kinase from Dechlorosoma suillum PS

 Score =  137 bits (344), Expect = 1e-36
 Identities = 128/471 (27%), Positives = 209/471 (44%), Gaps = 46/471 (9%)

Query: 22  YSLRLLLTLLMLSGISLSVGISSWLSTRDAK----HQI-EELFDAQMLQTAKMLELFYHD 76
           YSLR  L LL+L+     V    WL+T  A     H + +++FDA + QTA++L      
Sbjct: 11  YSLRRRLLLLLLA-----VSALIWLATIAAAFLRAHDLADDIFDAHLQQTARLLLA---- 61

Query: 77  EADFKHPQSQPQVLHVPDSQVSSFAEKSDALKLAYEHKLAFQIWSEAGQALVF---SDNI 133
                   ++P   HV        A            ++ FQIW    Q  V    S   
Sbjct: 62  --------TEPTSGHVEVRPTPGAAGG----------EVLFQIWRRTPQGPVLALHSAGA 103

Query: 134 GREPLTKFEQGYSKRVFEGELWHVFSFLSAKYKVWIITAQQDEVRQELVSQIMHNAVIVP 193
           G+ PLT  E G+++  + G  W  +S  S      +   Q  ++R  L  +     +   
Sbjct: 104 GQTPLTAVE-GFAETRWNGGEWRFYSEWSRDGLRQVQVGQSHDIRYALAQEAAMRLLAPL 162

Query: 194 LIVVPLTLLIVSLLFYILFRPLKTFERELMARSPNDLTPLAMS-LPKELVPVRLALNQYI 252
           ++ +PL    + +       PL     +L  R P+   PL    +P E+ P+  AL+   
Sbjct: 163 ILGLPLLAAALWVAVGRGLVPLARIAEQLDRRPPDSPQPLGSGPVPAEVAPLVQALDGLF 222

Query: 253 SSIARFIARERRFSADAAHELKTPLSVIKLHQQGLEGLVGDDPAQHIHLAAIDAGVKHMS 312
           + IAR +  ER+F+A+AAHEL+TPL+ +K   Q +    G+   +   L  +  G + ++
Sbjct: 223 ARIARLLDNERQFTANAAHELRTPLAALKTQAQ-VALRAGEGEVRQRALLNVLEGTERLA 281

Query: 313 HTVEQLLLLARVDSIAELNVQSYALLPMVEDALNQLMPLITEYEWNI-------DVDAGL 365
             VEQLL LAR+D  A  ++Q     P+  +    L P     + ++       D D  L
Sbjct: 282 RLVEQLLTLARLDPGANASLQPLDPRPLAREVCAVLAPAAQSRQVDLALDLAGSDGDGSL 341

Query: 366 ILKCDRFYWLVVLKNIIENACKYSPIETEISISAVQVAAGVEIKIADRGQGMTSEQIANA 425
            L  +     ++L+N+++NA +Y+     + +S  +    V + +AD G G+ +E    A
Sbjct: 342 TLAGNGDLLRILLRNLVDNAIRYTREGGHVWVSLARDGERVVLAVADDGPGIPAEARERA 401

Query: 426 TERFYRVNENEGIGAGLGLSICHHIIGLHQGQLTI-ASREQAGLAVTLFLP 475
             RF R+      G+GLGLSI   +  LH   L++    E  GL V +  P
Sbjct: 402 LGRFTRLAPARAEGSGLGLSIVQRVAELHGAALSLGVGPEGNGLRVLVVFP 452