Pairwise Alignments

Query, 264 a.a., hydrogenase accessory protein HypB (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 253 a.a., hydrogenase accessory protein HypB (RefSeq) from Shewanella sp. ANA-3

 Score =  481 bits (1239), Expect = e-141
 Identities = 236/264 (89%), Positives = 242/264 (91%), Gaps = 11/264 (4%)

Query: 1   MCKDCGCSLPRHSAIQQEHDHHTGHSHDHSHIHQQLHTNPQLNDKKTLSVIHKILDKNDV 60
           MCKDCGCSLPRHS           H H H H HQ+LHTNPQLNDKKTLSVIHKILDKNDV
Sbjct: 1   MCKDCGCSLPRHS-----------HEHGHLHHHQELHTNPQLNDKKTLSVIHKILDKNDV 49

Query: 61  EAAHNRAHFEAHHITAFNLMSSPGSGKTTLLEHLKEYTKLNYAVIEGDLETSRDADRLIA 120
           EAAHNRAHFEAH+ITAFNLMSSPGSGKTTLLEHLKEYT LNYAVIEGDLETSRDADRLIA
Sbjct: 50  EAAHNRAHFEAHNITAFNLMSSPGSGKTTLLEHLKEYTTLNYAVIEGDLETSRDADRLIA 109

Query: 121 KGIKAHQIQTGSACHLDAFMVHGALHHLPLEGVDICFVENVGNLVCPASYDVGTHKNIVL 180
           KGI+AHQIQTGSACHLDAFMVHGALHHLPLEG+DICFVENVGNLVCPASYDVGTHKNIVL
Sbjct: 110 KGIQAHQIQTGSACHLDAFMVHGALHHLPLEGLDICFVENVGNLVCPASYDVGTHKNIVL 169

Query: 181 LSVPEGDDKIEKYPVMFRRADLVLITKCDLLPYFDFSVDEAKTQLKKLNPNTQILEVSIK 240
           LSVPEGDDKIEKYPVMFRRADLVLITKCDLLPYFDFSVDEAK QLKKLNPNTQILEVSIK
Sbjct: 170 LSVPEGDDKIEKYPVMFRRADLVLITKCDLLPYFDFSVDEAKAQLKKLNPNTQILEVSIK 229

Query: 241 DGDSMHAVAAWLNSNLRPASGEPQ 264
           DGD+M AV AWLN NL  A+GEPQ
Sbjct: 230 DGDAMRAVVAWLNDNLHHAAGEPQ 253