Pairwise Alignments

Query, 257 a.a., hisF protein (cyclase) (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 272 a.a., imidazole glycerol phosphate synthase subunit HisF from Methanococcus maripaludis S2

 Score =  185 bits (470), Expect = 7e-52
 Identities = 106/271 (39%), Positives = 146/271 (53%), Gaps = 15/271 (5%)

Query: 1   MLAKRIVPCLDVKDGCVVKGVQFRNHEIVGDIVPLAARYAAEGADELVFYDITASAHDRV 60
           ML KRI+PCLD+K+G VVKG  F      GD V L+  Y  +GADELVF DITAS   R 
Sbjct: 1   MLTKRIIPCLDIKEGRVVKGTNFVELRDAGDPVELSKIYNEQGADELVFLDITASFEKRD 60

Query: 61  VDKSWVSRVAEQIDIPFCVAGGIKTITQARELLAFGADKISVNSPALSDPSLISRLQDEF 120
           +    V R AEQ+ IP  V GGIKT+   R++L  GADKIS+N+ A+  P LI    + F
Sbjct: 61  IIIDVVKRTAEQVFIPLTVGGGIKTVDDFRKILRAGADKISINTSAVKTPDLIKEASEIF 120

Query: 121 GRQCIVIGIDSFYDAASDSYKVKQFTGDEAATK-ETAWY--------------TQDWVEE 165
           G QC+V+ +D      +DS        +   TK  + W+                +W ++
Sbjct: 121 GTQCVVVAMDVKRKYITDSQDENLKNKNIFETKLGSCWFEVYIYGGREGTGIDAIEWAKK 180

Query: 166 VQKRGCGEIVLNVMNQDGVRGGYDIKQLSLVRQLCDVPLIASGGAGTMAHFRDVFIDAKV 225
           V+  G GEI+L  M+ DG + GYD+     + +   +P+IASGG G   H  D F + K 
Sbjct: 181 VEYLGAGEILLTSMDADGTKDGYDLVLTKAISENTKLPIIASGGCGNANHVVDAFTEGKA 240

Query: 226 DAALAASVFHKAIINIGELKQYLAAEGIAIR 256
           DAAL AS+ H     + +LK+ +    I +R
Sbjct: 241 DAALMASILHYRECTVNDLKKEVEKNNIPVR 271