Pairwise Alignments

Query, 257 a.a., hisF protein (cyclase) (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 241 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase from Methanococcus maripaludis S2

 Score = 76.6 bits (187), Expect = 4e-19
 Identities = 55/240 (22%), Positives = 117/240 (48%), Gaps = 16/240 (6%)

Query: 6   IVPCLDVKDG-CV--VKGVQFRNHEIVGDIVPLAARYAAEGADELVFYDITASAHDRVVD 62
           ++P +D+K+  CV  ++G   + H  + +   +A ++  EGA+ L   D+  +   + V+
Sbjct: 3   VIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRVN 62

Query: 63  KSWVSRVAEQIDIPFCVAGGIKTITQARELLAFGADKISVNSPALSDPSLISRLQDEFGR 122
             ++  + ++  +P  + GGI++I  A  L+  GA K+ + + A+ +P +I  L    G 
Sbjct: 63  DEFIEEIIKKSGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRIGS 122

Query: 123 QCIVIGIDSFYDAASDSYKVKQFTGDEAATKETAWYTQDWVEEV-QKRGCGEIVLNVMNQ 181
           + I++ +D     A D   V +        KE   YT   + ++ ++ G G I+   ++ 
Sbjct: 123 EKIMVSLD-----AKDGKVVIK------GWKEKTKYTPVQIGKILEEMGAGSILFTNVDS 171

Query: 182 DGVRGGYDIKQLSLVRQLCDVPLIASGGAGTMAHFRDVFIDAKVDAALAASVFHKAIINI 241
           +G+  G +I+    +     +P++ASGG  T+     +  +  V   +  S  +K +IN+
Sbjct: 172 EGLLNGINIEPTKELVDNLKIPIVASGGVTTIDDLLKL-KEIGVYGVVVGSAIYKNMINL 230