Pairwise Alignments

Query, 394 a.a., cation efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., cation diffusion facilitator family transporter from Rhodanobacter denitrificans MT42

 Score = 67.4 bits (163), Expect = 5e-16
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 1/122 (0%)

Query: 42  YVLYLTVITMVAEIVAGTIYGSMALLADGWHMGTHAAAFMITLFAYSYARKHANDPAFAF 101
           + L LT + +VAEI+ G +  S+ALL+D  HM T   A  I+L A   AR+   D    +
Sbjct: 20  WALGLTSMFLVAEIIGGLLTNSLALLSDAAHMATDVIALTISLTAVRLARR-PPDAKRTY 78

Query: 102 GTGKVSVLGGYTSAIALGLVALIMLIESGMRLINPENIHFNEAIFVALIGLSVNVLSMFL 161
           G  ++  +G   +   L LVA  +L E+  R   P ++     + +A++GL +N+ SM L
Sbjct: 79  GYARMEAIGALVNGGLLFLVASYILWEAVRRFSEPPSVASTGMLVIAVLGLMINLASMRL 138

Query: 162 LK 163
           LK
Sbjct: 139 LK 140



 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 7/153 (4%)

Query: 244 SGHDHNLRAAYFHVLADALTSVLAIAALLFGKYMGLTWLDPIMGIVGAIIISRWSWGLIQ 303
           SG   N++ AY  V AD L S+  I A L  K+ G    DPI+ ++  + +   +W L++
Sbjct: 143 SGESLNVKGAYLEVWADMLGSIGVIVAALIIKFTGFYIADPIIAVLIGLWVLPRTWILLR 202

Query: 304 QTSPILLDGGVNVALQRKVRETIEAVPD-HQVADLHIWRVSADHHAIMASIVSHSPKEAS 362
           +   +L++G        KVR  + A P    + D+H+W +S+   A+ A ++       +
Sbjct: 203 EAGNVLMEGAPGGVDTEKVRAEMLATPGVVALHDVHVWALSSTRSAMTAHVIMDGDASGA 262

Query: 363 -----YFNQLLSQFPELSHITIELHTCRQG-EC 389
                   Q+L    ++ H+T+++ T   G EC
Sbjct: 263 EALRLRLAQMLEASFDIHHVTLQVETTSCGLEC 295