Pairwise Alignments

Query, 394 a.a., cation efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 301 a.a., cation transporter from Pseudomonas fluorescens SBW25-INTG

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 1/136 (0%)

Query: 27  HGFSKQNADGEKNTRYVLYLTVITMVAEIVAGTIYGSMALLADGWHMGTHAAAFMITLFA 86
           H  +K  A  E+     L LT   MVAE++   I GS+ALL+D  HM T A A  I+L A
Sbjct: 5   HNHAKVRAGHERLLWLALGLTGSFMVAEVIGAFITGSLALLSDAAHMMTDALALGISLVA 64

Query: 87  YSYARKHANDPAFAFGTGKVSVLGGYTSAIALGLVALIMLIESGMRLINPENIHFNEAIF 146
              A K A D    FG  +  +L    +A+ L +VA  +L E+  RL  P  I     + 
Sbjct: 65  IQVA-KRAADRKRTFGYARFEILAAAFNALLLFVVAFYILYEAYQRLQAPAEIQSTGMLV 123

Query: 147 VALIGLSVNVLSMFLL 162
           +A++GL VN++SM LL
Sbjct: 124 IAVLGLIVNLISMRLL 139



 Score = 57.4 bits (137), Expect = 5e-13
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 244 SGHDHNLRAAYFHVLADALTSVLAIAALLFGKYMGLTWLDPIMGIVGAIIISRWSWGLIQ 303
           SG   N++ AY  V +D L S+  I A L   Y G  W+D ++       +   +W L++
Sbjct: 143 SGESLNVKGAYLEVWSDMLGSIGVIIAALVILYTGWGWVDSLVAAAIGFWVLPRTWTLLK 202

Query: 304 QTSPILLDG---GVNVALQRKVRETIEAVPDHQVADLHIWRVSADHHAIMASIVSHSPKE 360
           ++  +LL G   G+++    +    +  V D  V DLHIW +++  + +   +V+ S   
Sbjct: 203 ESMNVLLQGVPDGIDIEQVEQAIRGVRGVKD--VHDLHIWALTSGKNVLSTHLVADSALG 260

Query: 361 ASYFNQLLSQFPELSH 376
                Q+L Q  EL H
Sbjct: 261 TE--QQILVQVTELLH 274