Pairwise Alignments

Query, 394 a.a., cation efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., cation diffusion facilitator family transporter (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 25  HPHGFSKQNAD-GEKNTRYVLYLTVITMVAEIVAGTIYGSMALLADGWHMGTHAAAFMIT 83
           H HG +  +   G++     ++   +  VA+IV G + GS+AL+AD  H  +  A+ +I 
Sbjct: 3   HDHGHAHIDPQSGDRRVSIAIWANGLLTVAQIVGGILSGSLALIADALHNFSDMASLVIA 62

Query: 84  LFAYSYARKHANDPAFAFGTGKVSVLGGYTSAIALGLVALIMLIESGMRLINPENIHFNE 143
            FA   AR+ A D    FG G+V ++    +   L L+   ++ E GMR+I+P  +    
Sbjct: 63  FFARKIARRPA-DKRMTFGYGRVEIVAALINYTTLILIGFYLIYEGGMRMIDPPEVQGWT 121

Query: 144 AIFVALIGLSVNVLSMFL 161
            + +  + L V+ L+  L
Sbjct: 122 VVILGGVALVVDTLTALL 139



 Score = 32.0 bits (71), Expect = 3e-05
 Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 1/107 (0%)

Query: 249 NLRAAYFHVLADALTSVLAIAALLFGKYMGLTWLDPIMGIVGAIIISRWSWGLIQQTSPI 308
           N+RA + H L+DAL SV  I          + W+DP + I  A+ I   ++  I      
Sbjct: 149 NIRALFLHNLSDALASVAVIIGGSLILLYNMRWVDPAITIGIALYILYLAFTEIGGPIRT 208

Query: 309 LLDGGVNVALQRKVRETIEAVPD-HQVADLHIWRVSADHHAIMASIV 354
           L+ G         V + +  V     V  +H+W++     A+   +V
Sbjct: 209 LMLGSPPDIDNETVVQAMRGVDGVADVHHVHLWQMQEHEAALDCHVV 255