Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 337 a.a., Putative sulfite oxidase subunit YedY from Pseudomonas fluorescens FW300-N1B4

 Score =  332 bits (851), Expect = 8e-96
 Identities = 173/329 (52%), Positives = 223/329 (67%), Gaps = 9/329 (2%)

Query: 21  DNQVTPESVFKARRHIVKAMGLGAIGASISGYVQAGLFDLF-----GEQPQTSFITTPLT 75
           ++ VTPES++ +RR ++ A   G   +S+  +  A     +     G+ P       P T
Sbjct: 13  ESDVTPESLYLSRRSVLGATVAGLAVSSLPRWASADDVARYADVEPGKAPSWFAEKLPST 72

Query: 76  FEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEVERPIT 135
            +  A   +DE  TPF   T +NNFYEFGT K DP+ NA   K +PW + ++GEV +P  
Sbjct: 73  -KWGAVNVKDEAITPFKDATHYNNFYEFGTDKGDPAANAGTLKTQPWSVVVDGEVGKPGR 131

Query: 136 LDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFETAFDP 195
              +D  K + LEERIYRLRCVEAWSMVIPW+GFP++ALLK+V  TS+ K++ FET  DP
Sbjct: 132 YALEDFMKPYQLEERIYRLRCVEAWSMVIPWIGFPVSALLKEVEPTSRAKFIRFETLQDP 191

Query: 196 EQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLVVPWKY 255
           + MPGQ+S      I +PYVEGL + EAMN L +++VG+YG+ LP QNGAP+RLVVPWKY
Sbjct: 192 KSMPGQRSGF--ALIDWPYVEGLRLDEAMNPLAILAVGMYGRELPNQNGAPLRLVVPWKY 249

Query: 256 GFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGEGGLFS 315
           GFKSIKSIVRI ++ +QP T+W  +A  EYGFYANVNP VDHPRW+QA ERR+   GLF 
Sbjct: 250 GFKSIKSIVRISLVSEQPKTTWQSIASDEYGFYANVNPTVDHPRWTQARERRL-PSGLFK 308

Query: 316 AQRIDTLPFNGYSEFVASLYEGMDLRQFY 344
               DT  FNGYS+ VASLY G+DLR+ Y
Sbjct: 309 PNVRDTQMFNGYSDEVASLYTGLDLRKNY 337