Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 337 a.a., protein-methionine-sulfoxide reductase catalytic subunit MsrP from Pseudomonas sp. BP01

 Score =  323 bits (829), Expect = 3e-93
 Identities = 171/334 (51%), Positives = 222/334 (66%), Gaps = 21/334 (6%)

Query: 22  NQVTPESVFKARRHIV----KAMGLGAI-----GASISGY--VQAGLFDLFGEQPQTSFI 70
           +++TPE ++ +RR ++      + LGA+      A +S Y  VQAG    +      +  
Sbjct: 14  SEITPEGIYLSRRTLLGGSLAGLALGALPGRAGAAEVSRYADVQAGAAPAWFTDKLAATH 73

Query: 71  TTPLTFEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEV 130
              +T +       DE  TPF   T +NNFYEFG  K DP+ N    + EPW + ++GEV
Sbjct: 74  WQAVTVK-------DEAITPFKDATHYNNFYEFGPDKGDPAANGDSLETEPWSIVVDGEV 126

Query: 131 ERPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFE 190
            +P     +D  K + LEER+YRLRCVEAWSMVIPW+GFPLA +LK+V  TS+ +YV FE
Sbjct: 127 GKPGRYALEDFVKPYQLEERVYRLRCVEAWSMVIPWLGFPLAQVLKQVEPTSRARYVRFE 186

Query: 191 TAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLV 250
           T  DP+ MPGQ+S      I +PY EGL + EAM+ L +++VG+YG+ LP QNGAP+RLV
Sbjct: 187 TLKDPQHMPGQRSGF--ALIDWPYREGLRLDEAMHPLAILAVGMYGRELPNQNGAPLRLV 244

Query: 251 VPWKYGFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGE 310
           VPWKYGFKSIKSIVRI ++ +QP T+W  LAP EYGFYANVNP VDHPRWSQA ERR+  
Sbjct: 245 VPWKYGFKSIKSIVRISLVAEQPGTTWEGLAPDEYGFYANVNPTVDHPRWSQARERRL-P 303

Query: 311 GGLFSAQRIDTLPFNGYSEFVASLYEGMDLRQFY 344
            GLFS    +T  FNGY++ VASLY G+DLR+ Y
Sbjct: 304 SGLFSPNVRETQMFNGYADEVASLYTGLDLRKNY 337