Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 324 a.a., sulfite oxidase subunit YedY from Marinobacter adhaerens HP15

 Score =  355 bits (912), Expect = e-103
 Identities = 179/334 (53%), Positives = 226/334 (67%), Gaps = 12/334 (3%)

Query: 11  ILKKARWHIQDNQVTPESVFKARRHIVKAMGLGAIGASISGYVQAGLFDLFGEQPQTSFI 70
           I K+  W +  ++VTPESV+  RR  +      A G S+ G + A    + GE       
Sbjct: 3   IKKRPSWALPHSEVTPESVYLNRRQFMSGTLAVAAGLSVPGLLSAAKLPVPGEA------ 56

Query: 71  TTPLTFEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEV 130
              L F     F  DE +TPF+ VT +NNFYEFGT K DP+  A +  V+PW + +EGE 
Sbjct: 57  ---LDFVPMPGFSTDEEKTPFEDVTRYNNFYEFGTGKGDPAKYADEMTVDPWSVVVEGEC 113

Query: 131 ERPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFE 190
           +RP     +DL K    +ER+YRLRCVEAWSMVIPW+G PL  +LK++  TS+ KYV FE
Sbjct: 114 DRPGAYALEDLLKPHEYQERVYRLRCVEAWSMVIPWIGIPLVDILKRLEPTSRAKYVYFE 173

Query: 191 TAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLV 250
           T +DP+QM GQ+S  +   I +PY EGL + EAMNEL+ ++VGLYGKT+P QNGAPIRLV
Sbjct: 174 TLYDPDQMRGQRS--LFSTIDWPYQEGLRMDEAMNELSFLAVGLYGKTMPNQNGAPIRLV 231

Query: 251 VPWKYGFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGE 310
           VPWKYGFKSIKSIV+IR  +++P T+W  LAP EYGFYANVNP VDHPRWSQ  ERR+  
Sbjct: 232 VPWKYGFKSIKSIVKIRFQEERPKTTWEMLAPQEYGFYANVNPEVDHPRWSQKRERRL-P 290

Query: 311 GGLFSAQRIDTLPFNGYSEFVASLYEGMDLRQFY 344
            GL S   ++T+ FNGY E VA LY+GMDL +FY
Sbjct: 291 SGLLSPNYMETVKFNGYGEQVADLYKGMDLSKFY 324