Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 305 a.a., oxidoreductase molybdopterin binding (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  319 bits (817), Expect = 7e-92
 Identities = 170/321 (52%), Positives = 210/321 (65%), Gaps = 31/321 (9%)

Query: 24  VTPESVFKARRHIVKAMGLGAIGASISGYVQAGLFDLFGEQPQTSFITTPLTFEANARFG 83
           +TP SVF  RR  + +    A  A I    QA   D  G +       TP T E      
Sbjct: 16  ITPRSVFLNRRSFMAS----AAAAGIFAGSQATARDFAGGE-------TPNTLE------ 58

Query: 84  QDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRIEGEVERPITLDYQDLTK 143
                    ++T++NNFYEFG  K DP+  A     +PW + ++G V+ P T D  DL  
Sbjct: 59  ---------EITSYNNFYEFGFDKGDPAKYAHALTTDPWSITVDGLVDNPGTYDIADLVD 109

Query: 144 LFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKYVAFETAFDPEQMPGQKS 203
              +EERIYR RCVEAWSMVIPW G  L  +L K+GV    KYVAFET   P +MP Q+ 
Sbjct: 110 AAEIEERIYRFRCVEAWSMVIPWNGIELNKVLAKLGVQPGAKYVAFETLVRPSEMPAQRG 169

Query: 204 RLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAPIRLVVPWKYGFKSIKSI 263
              GG I +PY EGL + EAM+ LTL++ G+YG  +P QNGAPIRLVVPWKYGFKSIKSI
Sbjct: 170 ---GGNIEWPYREGLRLDEAMHPLTLLATGIYGAPMPKQNGAPIRLVVPWKYGFKSIKSI 226

Query: 264 VRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASERRIGEGGLFSAQRIDTLP 323
           VRI ++D++PPT+WN L P EYGFY+NVNP VDHPRWSQA+ERRIG+ GLF A+R +TL 
Sbjct: 227 VRISLVDQEPPTTWNMLQPREYGFYSNVNPEVDHPRWSQATERRIGD-GLF-ARRRETLM 284

Query: 324 FNGYSEFVASLYEGMDLRQFY 344
           FNGY++ VASLY+GMDL +FY
Sbjct: 285 FNGYADQVASLYDGMDLTEFY 305