Pairwise Alignments

Query, 344 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 331 a.a., protein-methionine-sulfoxide reductase catalytic subunit MsrP from Ralstonia sp. UNC404CL21Col

 Score =  342 bits (876), Expect = 1e-98
 Identities = 177/341 (51%), Positives = 229/341 (67%), Gaps = 22/341 (6%)

Query: 11  ILKKARW----HIQDNQVTPESVFKARRHIVKAMGLGAIGASISGYVQAGLFDLFGEQPQ 66
           ++K  RW     I  +++TP+ +F+ RR  + A  +GA GA+++ +      + F   P 
Sbjct: 2   LIKTDRWLRGDDIPASEITPQHIFEQRRRFLAAAAMGAAGATLAPWASR---EAFAANPS 58

Query: 67  TSFITTPLTFEANARFGQDEVRTPFDKVTTHNNFYEFGTSKQDPSDNAQQYKVEPWQLRI 126
            +     L  + N  +   E  TP+D+VTT+NNFYEFGT K DP+  A   +  PWQ+ +
Sbjct: 59  LA----KLPGKPNPAYTTVEKATPYDQVTTYNNFYEFGTDKADPARYAGTLRPHPWQVSV 114

Query: 127 EGEVERPITLDYQDLTKLFPLEERIYRLRCVEAWSMVIPWVGFPLAALLKKVGVTSKGKY 186
           EG V+ P T D  DL KL P+EER+YRLRCVE WSMVIPWVGFPLA L+K+V      KY
Sbjct: 115 EGLVKTPKTYDLDDLMKLAPMEERVYRLRCVEGWSMVIPWVGFPLAELIKRVEPQGSAKY 174

Query: 187 VAFETAFDPEQMPGQKSRLMGGGIHYPYVEGLTIAEAMNELTLMSVGLYGKTLPPQNGAP 246
           + F +  D  QMPG  S ++     +PY EGL + EAM+ L L++ GLYG+ LP QNGAP
Sbjct: 175 IQFISLADKRQMPGISSPVL----EWPYSEGLRLDEAMHPLALLTFGLYGQVLPNQNGAP 230

Query: 247 IRLVVPWKYGFKSIKSIVRIRVMDKQPPTSWNQLAPHEYGFYANVNPAVDHPRWSQASER 306
           +R++VPWKYGFKS KSIV+IR +DKQPPTSWN  A +EYGFY+NVNP VDHPRWSQA+ER
Sbjct: 231 VRVIVPWKYGFKSAKSIVKIRFVDKQPPTSWNIAAANEYGFYSNVNPTVDHPRWSQATER 290

Query: 307 RIGE-----GGLFSAQRIDTLPFNGYSEFVASLYEGMDLRQ 342
           RIGE     GGLF+ +R  TL FNGY + VA LY GMDLR+
Sbjct: 291 RIGEDKGGFGGLFAPKR-KTLMFNGYDQ-VAPLYAGMDLRK 329