Pairwise Alignments

Query, 537 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 458 a.a., DNA recombination protein RmuC from Pedobacter sp. GW460-11-11-14-LB5

 Score =  313 bits (802), Expect = 9e-90
 Identities = 158/419 (37%), Positives = 265/419 (63%), Gaps = 4/419 (0%)

Query: 67  VDDKDSQLRLCQQRLEQKIEHLG-KAEALAERVPSLEQQLSDSHRRQLELQLALSKSNAM 125
           +  ++  L++   + ++++ +L  + E +   +   +Q+L D  + + +    L+ +N  
Sbjct: 39  IKSENESLKISLAKADERVSNLSVEKEHITILLKQEQQRLIDELQAERD---RLADANRE 95

Query: 126 QQTIQAKADAQQESLREKIATLESAEVRLQTQFENLANRIFEERSENFKHQNANQLEGVL 185
            ++ ++   A++E L E+  + E ++ +L   FE +AN+I EE+S  F  QN   L+ +L
Sbjct: 96  LESTRSFYVAEKEKLAEQKLSYEQSQEKLNKDFELIANKILEEKSSKFIEQNRTNLDIIL 155

Query: 186 GPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKGDNKQQ 245
            PLK+ ++ F  ++ + Y  E  ER+ LK  +  L D + ++ +DA NLTKALKGD+K+Q
Sbjct: 156 NPLKENIKAFEDKVEKVYKAESDERNTLKGVISLLMDQSKQIQEDANNLTKALKGDSKKQ 215

Query: 246 GNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKMSLI 305
           GNWGEVIL++VL+ SGL    EY  Q       G R++PDV++ LP+NK +V+DAK+SL+
Sbjct: 216 GNWGEVILEKVLERSGLVRDQEYRIQASHVSAEGGRYQPDVVIDLPDNKHLVVDAKVSLV 275

Query: 306 SYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEPAFL 365
           +YER  ++E    R+  I  H+ SI+NHI  LS K+YQ L+ + S D+VL+F+PIE +F 
Sbjct: 276 AYERSVSAETDEERDGFIKAHLASIKNHILELSSKNYQDLYKINSPDFVLLFVPIESSFS 335

Query: 366 LALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGRIYDKL 425
           +A++ D  L NFA ++ +++VSP+ LL  LRTI ++W+ E QN++   IA+ +G +YDK 
Sbjct: 336 IAIQKDAELFNFAWDRRVVIVSPSTLLATLRTIASMWKQERQNRNVMEIARLSGSMYDKF 395

Query: 426 CGYLEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDKMLLE 484
            G++ DME +G+ + N +  Y  A+NKLS G GNL   +  +++LG  T+KQ+D   L+
Sbjct: 396 VGFVADMENIGKHIKNGQDAYDKAINKLSVGAGNLTNTSEKIKKLGAKTTKQIDTKYLD 454