Pairwise Alignments

Query, 537 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 521 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  950 bits (2455), Expect = 0.0
 Identities = 486/528 (92%), Positives = 507/528 (96%), Gaps = 7/528 (1%)

Query: 1   MPFSQSFSLAQIIGLIAVAFLGLLIGALLNQRLTRSRWQQFKDDLEQEMRQVNEDAELSL 60
           MPFSQSFSLAQIIGL+AVAFLGLLIGALLNQRLTRSRWQQFKD+LEQEMRQVNEDAELSL
Sbjct: 1   MPFSQSFSLAQIIGLLAVAFLGLLIGALLNQRLTRSRWQQFKDELEQEMRQVNEDAELSL 60

Query: 61  AQQQILVDDKDSQLRLCQQRLEQKIEHLGKAEALAERVPSLEQQLSDSHRRQLELQLALS 120
           AQQQ+LVDDKD+QLR CQQRLEQKIE LGKAEA+AER+PS+EQQL+DSHRRQLELQLALS
Sbjct: 61  AQQQVLVDDKDNQLRQCQQRLEQKIEQLGKAEAMAERLPSIEQQLADSHRRQLELQLALS 120

Query: 121 KSNAMQQTIQAKADAQQESLREKIATLESAEVRLQTQFENLANRIFEERSENFKHQNANQ 180
           KSNAMQQTIQAKADAQQ +++EKIATLE AEVRLQTQFENLANRIFEERSE+FKHQNANQ
Sbjct: 121 KSNAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFENLANRIFEERSESFKHQNANQ 180

Query: 181 LEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRDLNLKMSQDAINLTKALKG 240
           LEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLR+LNLKMSQDAINLTKALKG
Sbjct: 181 LEGVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKG 240

Query: 241 DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDA 300
           DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDA
Sbjct: 241 DNKQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDA 300

Query: 301 KMSLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPI 360
           KMSLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPI
Sbjct: 301 KMSLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPI 360

Query: 361 EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR 420
           EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR
Sbjct: 361 EPAFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGR 420

Query: 421 IYDKLCGYLEDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK 480
           IYDKLCGYL+DMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK
Sbjct: 421 IYDKLCGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDK 480

Query: 481 MLLEKALNEALDDSDVAQTNDIEDDYTASASESLSMVTKTEDADALEQ 528
           MLLEKALNEALD+SD   + D       + +   +++T TEDA ALEQ
Sbjct: 481 MLLEKALNEALDESDAQDSGD-------NQTHRDTLLTHTEDATALEQ 521