Pairwise Alignments

Query, 287 a.a., hypothetical thioredoxin-like protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 289 a.a., thioredoxin from Pseudomonas stutzeri RCH2

 Score =  129 bits (324), Expect = 8e-35
 Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 11/289 (3%)

Query: 4   ILDLTKDNIQQVV-DASMQQLVVMVFWAQPQPQSVAMVQTLEQLATQHAGRFVLAKVNCE 62
           I D+T  + +Q+V + S  + V++ FWA+      A++  L ++A ++ G  +LAKVNC+
Sbjct: 7   IFDVTTASFEQLVLENSFHKPVLVDFWAEWCAPCKALMPMLAKIAEEYQGELLLAKVNCD 66

Query: 63  AELEIANYFRIQALPTTLVLDKGQPIDGFAGLQEAVQVSAMLEKHL----PPLWQLQLEQ 118
            E E+   F I++LPT ++   GQP+DGFAG Q    + AMLE H+     P   L LE 
Sbjct: 67  IEQEVVARFGIRSLPTVVLFKDGQPVDGFAGAQPESAIRAMLEPHVQAPATPQGNL-LES 125

Query: 119 AKALLALTQVSAEDLTTAAVLLKDAYSASNHAAEVSLVLADVYLMQGELAQAQGLLEQIG 178
           A+A  A  +        A   L+   S  N  A   ++ A     +GELA+A+ +L+ + 
Sbjct: 126 AQAAFAEGR-----FAEAETQLQQLLSEDNENAAGLILYARCLAERGELAEAETVLDAVK 180

Query: 179 LADQDGYYQSLRAKLTLALDAADTPEIRELQQKFEQNPHDLVLLLELCKALHSAHRDEEA 238
             +        RA+LT    A D PE+  L+ +  QN  D     +L     +  + E A
Sbjct: 181 GDEHKQALAGARAQLTFLRQATDLPEVATLKSRLAQNGEDDEAAYQLAIQQLARQQYEAA 240

Query: 239 LTHLYGVLSKDLSAENGKVKQTFMEILTALGQGNSLANQYRRKLYTLLY 287
           L  L  +  ++ +  +G+  +T +++   LG  + L   YRRKLY  +Y
Sbjct: 241 LDGLLKLFVRNRNYADGQPHKTLLQVFDLLGNDHPLVTLYRRKLYQAIY 289