Pairwise Alignments

Query, 287 a.a., hypothetical thioredoxin-like protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 290 a.a., Thioredoxin from Pseudomonas syringae pv. syringae B728a

 Score =  135 bits (339), Expect = 1e-36
 Identities = 88/288 (30%), Positives = 145/288 (50%), Gaps = 9/288 (3%)

Query: 4   ILDLTKDNIQQ-VVDASMQQLVVMVFWAQPQPQSVAMVQTLEQLATQHAGRFVLAKVNCE 62
           I D T  N  Q V+D S  Q V++ FWA+       ++  L+Q+   + G  +LAKVNC+
Sbjct: 8   IFDATAANFDQLVIDKSFDQPVLVDFWAEWCAPCKVLMPLLQQITESYQGELLLAKVNCD 67

Query: 63  AELEIANYFRIQALPTTLVLDKGQPIDGFAGLQEAVQVSAMLEKHL---PPLWQLQLEQA 119
            E +I   F I++LPT ++   GQP+DGFAG Q   ++  +L++H+   PP     L+QA
Sbjct: 68  IEQDIVARFGIRSLPTVVLFKDGQPVDGFAGAQPESEIRKILDQHVVMPPPPAADPLKQA 127

Query: 120 KALLALTQVSAEDLTTAAVLLKDAYSASNHAAEVSLVLADVYLMQGELAQAQGLLEQIGL 179
           +AL A ++ +  +     +L +D     N      ++ A     +GEL++A+ +L+ +  
Sbjct: 128 QALFAESRFAEAEAQLKVLLGED-----NTNGAALILYARCLAERGELSEAKAVLDAVTG 182

Query: 180 ADQDGYYQSLRAKLTLALDAADTPEIRELQQKFEQNPHDLVLLLELCKALHSAHRDEEAL 239
                     +A+LT    AA  P+  EL+ +  QNP D    L+L     S  + E AL
Sbjct: 183 DAHKAELAGAKAQLTFLAQAATLPDAAELKSRLAQNPQDDEAALQLAIQQLSRQQYEAAL 242

Query: 240 THLYGVLSKDLSAENGKVKQTFMEILTALGQGNSLANQYRRKLYTLLY 287
             L  +  ++ +   G   +T +++   LG  + L   YRRKL+  LY
Sbjct: 243 DGLLKLFIRNRNYAEGLPHKTLLQVFDLLGNEHPLVTAYRRKLFAALY 290