Pairwise Alignments

Query, 243 a.a., cobB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 279 a.a., NAD-dependent deacetylase from Pseudomonas fluorescens FW300-N2C3

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 74/243 (30%), Positives = 113/243 (46%), Gaps = 56/243 (23%)

Query: 3   QHIVVLTGAGISAESGLRTFRDQDGLWEEH----HIEDVATPEGYAKDAELVERFYNSR- 57
           +  +VLTGAGIS  SG+  +RD DG+        + E +A PE          R Y +R 
Sbjct: 20  RRFLVLTGAGISTPSGIPDYRDSDGVRRGRQPMMYQEFLAQPEA--------RRRYWARA 71

Query: 58  ---WEQLHCGTVMPNAAHLALAKLEAE--FSGQLLVVTQNIDDLHERAGSRRLLHMHGEL 112
              W ++      PN AH ALA+L+A+   +G   ++TQN+D LH++AGS+ ++ +HG L
Sbjct: 72  MLGWPRVR--QARPNVAHEALAELQAQQRITG---LITQNVDTLHDQAGSQDVIELHGSL 126

Query: 113 SKGRC----PRSRQTFLLR-----EPF--GVN-----NGCTCCIPA-------------- 142
            +  C     RS +  + R      P+  GV+     +G T   PA              
Sbjct: 127 HRVLCLDCGQRSERQQIQRLMETANPYLAGVDAVQAPDGDTLLDPAFEARFQVPHCPHCG 186

Query: 143 -QRLRPHVVWFGE--MPLGMDRIHDALDNCDLFIAIGTSGTVYPAAGFVDTANHHGAQTV 199
            +RL+P VV+FGE   PL   R   A++  D  + +G+S   Y A          G   +
Sbjct: 187 GERLKPDVVFFGENVAPLTATRAMQAVEQADGLLVVGSSLMAYSAFRLCRAIKDQGKPLL 246

Query: 200 EVN 202
            +N
Sbjct: 247 AIN 249