Pairwise Alignments

Query, 243 a.a., cobB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 252 a.a., NAD-dependent protein deacetylases, SIR2 family from Pseudomonas stutzeri RCH2

 Score =  158 bits (400), Expect = 8e-44
 Identities = 98/238 (41%), Positives = 134/238 (56%), Gaps = 17/238 (7%)

Query: 3   QHIVVLTGAGISAESGLRTFRDQ-DGLWEEHHIEDVATPEGYAKDAELVERFYNSRWEQL 61
           +H+VV TGAG+SAESG+ TFRD   GLWE     ++AT + + +D  LV  +Y   W ++
Sbjct: 14  RHVVVFTGAGVSAESGIPTFRDALTGLWERFDASELATADAFRRDPALVWGWYE--WRRM 71

Query: 62  HCGTVMPNAAHLALAKLEAEFSGQLLVVTQNIDDLHERAGSRRLLHMHGELSKGRC--PR 119
                 PN AHLA+A+L A    QL ++TQN+DDLHERAGS+ ++H+HG L + RC    
Sbjct: 72  RVLQAQPNPAHLAIAEL-ARHVPQLTLITQNVDDLHERAGSQAVIHLHGSLHRPRCFACA 130

Query: 120 SRQTFLLREPFGVNNG-------CTCCIPAQRLRPHVVWFGE-MPL-GMDRIHDALDNCD 170
                 L  P    +G       C+ C    RLRP VVWFGE +P+  ++    A   CD
Sbjct: 131 REPAEPLPAPDEPEDGRRLEPPRCSHC--GGRLRPGVVWFGESLPVAALNAAFQAAGECD 188

Query: 171 LFIAIGTSGTVYPAAGFVDTANHHGAQTVEVNLQSPDRHSQFQYHLTGRAGELVPKLV 228
           L +++GTSG VYPAA     A   GA  V VN Q        +Y +   AGE +P+L+
Sbjct: 189 LLLSVGTSGVVYPAAEVPHRARDAGATVVHVNPQGEPTAGNREYLIALPAGEALPELL 246