Pairwise Alignments

Query, 243 a.a., cobB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 238 a.a., NAD-dependent protein deacetylases, SIR2 family from Sphingomonas koreensis DSMZ 15582

 Score =  233 bits (593), Expect = 3e-66
 Identities = 122/230 (53%), Positives = 155/230 (67%), Gaps = 3/230 (1%)

Query: 3   QHIVVLTGAGISAESGLRTFRDQDGLWEEHHIEDVATPEGYAKDAELVERFYNSRWEQLH 62
           ++IV+LTGAG+SAESG+ TFR   GLWE H +EDV TP+  A D  LV RFY+ R  +L 
Sbjct: 5   RNIVILTGAGVSAESGVATFRGPGGLWEGHRVEDVCTPQALAHDPVLVHRFYDERRAKL- 63

Query: 63  CGTVMPNAAHLALAKLEAEFSGQLLVVTQNIDDLHERAGSRRLLHMHGELSKGRCPRSRQ 122
             TV PNAAH ALA+L+A++ G+LL+VTQN+DDLHERAGS+RL+HMHGEL+   C     
Sbjct: 64  -ATVAPNAAHHALARLDAQWPGELLLVTQNVDDLHERAGSKRLIHMHGELNAALCAECDA 122

Query: 123 TFLLREPFGVNNGCTCCIPAQRLRPHVVWFGEMPLGMDRIHDALDNCDLFIAIGTSGTVY 182
                +       C  C  A  LRP +V+FGEMP  MD I  A+   DLF++IGTSG VY
Sbjct: 123 RKPWTDTLPPRTRCATC-GAPSLRPDIVFFGEMPYHMDAIDAAIARADLFVSIGTSGAVY 181

Query: 183 PAAGFVDTANHHGAQTVEVNLQSPDRHSQFQYHLTGRAGELVPKLVDTIL 232
           PAAGFV TA +HGA T+E+NL   +  + F     G AG LVP+ VD++L
Sbjct: 182 PAAGFVRTARYHGADTLELNLDRSEGSAWFGESRLGPAGTLVPEWVDSLL 231