Pairwise Alignments

Query, 243 a.a., cobB protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 289 a.a., NAD-dependent deacetylase from Burkholderia phytofirmans PsJN

 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 81/276 (29%), Positives = 118/276 (42%), Gaps = 58/276 (21%)

Query: 2   YQHIVVLTGAGISAESGLRTFRDQDGLWEEHHIEDVATPEGYAKDAELVERFYNSRWEQL 61
           Y  + VLTGAGIS +SG+  +RD +G W+        T + +     + +R+    W + 
Sbjct: 28  YPRLFVLTGAGISTDSGIPGYRDDNGEWKR---SPPITVQEFLGTLAMRQRY----WARS 80

Query: 62  HCGT-----VMPNAAHLALAKLEAEFSGQL-LVVTQNIDDLHERAGSRRLLHMHGELSKG 115
             G        PNAAH ALA+LEA  +G +  +VTQN+D LH+RAGSR ++ +HG +   
Sbjct: 81  MVGWPVVAHAQPNAAHTALARLEA--AGHVPTLVTQNVDGLHQRAGSREVIELHGGIDGV 138

Query: 116 RC---------PRSRQTFLLREPFGVN-----------------------NGCTCCIPAQ 143
            C            +QT     P  V+                         C+ C    
Sbjct: 139 TCLDCGMQHSRASIQQTLEADNPALVDVTAETAADGDAHLEWHDLGGFRIPSCSNC--GG 196

Query: 144 RLRPHVVWFGEMPLGMDRIH---DALDNCDLFIAIGTSGTVYPAAGFVDTANHHGAQTVE 200
            L+P VV+FGE  +  +R+     ALD  D  + +G+S  VY    F   A   G   V 
Sbjct: 197 LLKPAVVFFGE-SVPKERVEAASHALDVADAVLVVGSSLMVYSGYRFCVWAQKQGKPVVA 255

Query: 201 VNLQSPDRHSQFQYHLTGRAGELVPKLVDTILAGRV 236
           +NL            +T    E +     T LAGR+
Sbjct: 256 INLGRTRADPLLSLKVTAPCAETL-----TALAGRL 286