Pairwise Alignments

Query, 388 a.a., succinyl-CoA synthase, beta subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 362 a.a., ADP-forming succinate--CoA ligase subunit beta from Methanococcus maripaludis S2

 Score =  219 bits (559), Expect = 7e-62
 Identities = 137/381 (35%), Positives = 202/381 (53%), Gaps = 28/381 (7%)

Query: 1   MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRIGGNLWVVKCQVHAGGRGKAGGV 60
           M LHEY+AK +F E  +P+ +        E+++          V+K QV  GGRGKAGG+
Sbjct: 1   MKLHEYEAKEIFKENNIPIPKNKLVSGKVESIDYPV-------VIKAQVLVGGRGKAGGI 53

Query: 61  KVTGDKEEIRAFAEYWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRR 120
               + ++     E  +G  +       KG+ V K+L+E    I  E Y+G VV+R  + 
Sbjct: 54  LFADNVDDANEKIESLIGNTV-------KGELVEKVLLEEQIKIVKEYYVGVVVNRNEKN 106

Query: 121 VVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPFQARDLGFKLGLNPTQMKQFTKI 180
            V + STEGGV+IE+VA +TPE I K  ++P     P+ AR +  K G+   ++ +   +
Sbjct: 107 NVVIFSTEGGVDIEEVASKTPEKIIKLSLNPEKEFLPYLARGMLKKAGIPSAEIPKVADV 166

Query: 181 FMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPKIKAMHDPSQDDA 240
              +   F + D  L EINPLV T +G +   D  + +D +A FR    K      Q+ +
Sbjct: 167 LCKVYKAFKNMDGILAEINPLVFTEDGKIIAADAVLNVDDDAYFRHNYEKFEEFNKQEKS 226

Query: 241 REAHAAMFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
                   E  YV LDG++  + NGAGL + +MDIV   GG PA FLDVGGG+ +E V +
Sbjct: 227 --------EFAYVELDGDIAVIGNGAGLTLASMDIVKEFGGNPACFLDVGGGSNRETVKK 278

Query: 301 AFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGREV 360
           A     S  NVK   +NI GGI RCD ++ GI+  +KE    +   VR+ GTN E GR +
Sbjct: 279 ALLKATSRKNVKGAFINILGGITRCDEVSMGIVDVLKE-NPNLKFAVRMMGTNEEEGRRI 337

Query: 361 LAKSGLDII-----AANSLTD 376
           L+++G+        AA +LT+
Sbjct: 338 LSENGISFESSMEGAAKALTE 358