Pairwise Alignments

Query, 1091 a.a., AcrB/AcrD/AcrF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1064 a.a., hydrophobic/amphiphilic exporter-1, HAE1 family from Paraburkholderia bryophila 376MFSha3.1

 Score =  473 bits (1218), Expect = e-137
 Identities = 318/1095 (29%), Positives = 557/1095 (50%), Gaps = 88/1095 (8%)

Query: 7    SVKRPVTVWMFMLAIMLFGMVGFSRLAVKLLPDLSYPTLTIRTMYDGAAPVEVEQLVSKP 66
            S+  PV   M M+A ++ G+  + RL V   PD+++P + ++T Y GA+P  VE  V++ 
Sbjct: 7    SIGNPVLATMMMMAFLVIGLFSYQRLKVDQFPDITFPIVVVQTAYPGASPESVESDVTRK 66

Query: 67   IEEAVGVVKGLRKISSISRSGMSDVVLEFEWGTTMDMASLDVREKLDTIALPL--DVKKP 124
            IEEA+  + G+ +I+S S    S V+++F+       A+ DVR+K+  I   L   VK+P
Sbjct: 67   IEEAINTISGIDQITSRSYDAQSVVIVQFDLAVDAVQAAQDVRDKIALIRPDLRDGVKEP 126

Query: 125  LLLRFNPNLDPIMRLALSVPNASEAELKQMRTYAEEELKRRLEALSGVAAVRLSGGLEQE 184
             +LR++P   PI+ +A+S    +    + + T A++ +++RLE + GV +V L GG++++
Sbjct: 127  RVLRYDPADMPIVTVAVSNAPGASLSTRDLTTVADQIVRKRLETVRGVGSVSLVGGVKRQ 186

Query: 185  VHIQLNQEKLSQLNLNADDIKRRINEENINLSAGKVIQGDREYLVRTLNQFNSLDELGQV 244
            V I +N +KL  L++  D + R +  EN  + AG +     E  V+   +F +  +  ++
Sbjct: 187  VQIDVNPQKLQALSVGVDQVIRAVQNENQEIPAGPLTSNSVEQTVQVKGRFETPADFKRI 246

Query: 245  IVYR-DAQTL----------VRLFEVATITDAYKERSDITRIGSQESIELAIYKEGDANT 293
            IV R  AQ+           V L +VA + D  +E   +  +  + ++ L+I K    NT
Sbjct: 247  IVARRGAQSAIPTASSTSQPVTLDQVADVIDGQQEADSMALLNGRRALFLSIIKAQGENT 306

Query: 294  VAVAKKLRDELVKINKD-PQQNKLEVIYDQSEFIESAVSEVTSSALMGSVLAMLVIYLFL 352
            V VA  +R E+ ++    P   KL++  D S  IE +V+EV  +   G++L + +++LFL
Sbjct: 307  VDVAHGVRAEVARLQPQLPPGVKLDITDDSSINIEESVNEVKRTLFEGALLTVFIVFLFL 366

Query: 353  RNIIPTLIISISIPFSVIATFNMMYFADISLNIMSLGGIALAIGLLVDNAIVVLENIDRC 412
             +   T+I  +++P ++I TF +MY    ++N+++L  ++L +GLL+D+AIVV ENI R 
Sbjct: 367  GSWRSTVITGLTLPIALIGTFAVMYACGFTINVITLMALSLCVGLLIDDAIVVRENIVRH 426

Query: 413  RSEGMSKLDAAVTGTKEVAGAIFASTMTTLAVFVPLVFVDGIAGALFSDQALTVTFALLA 472
               G     AA+ GTKE+A A+ A+T + +AVF+P+ F+ GI G  F    +TV  A+L 
Sbjct: 427  VQLGADHRTAALDGTKEIALAVLATTFSIVAVFLPVGFMGGIIGRFFHQFGITVAAAVLI 486

Query: 473  SLLVALTSIPMLASREGFKILPELMKKTPKEKPTTKLGKLKHYSATVFSFPIVLLFNYLP 532
            S+ V+ T  PML+S     I P+       +  T + G                 + Y  
Sbjct: 487  SMFVSFTLDPMLSS-----IWPD---PDLHDADTGRKG-----------------YRY-- 519

Query: 533  SALLTFVLIIGRFFSWLLGLIMRPLSSGFNFVYHSTESIYHKLLAIALRKQLATLLLTTG 592
                      GRF    L L  + ++           ++Y +LL  +L  +  TL++   
Sbjct: 520  ----------GRFVERSLHLFDKQIA--------QLSALYQRLLGWSLEHRAITLVVAAA 561

Query: 593  ITGACISLLPRLGMELIPPMNQGEFYVEILLPPGTAVGETDRILQQLALSIKDRPEVKHA 652
                 + L+P +G E +P  +     + +  P GT++  T + +QQ+   +   PEV++ 
Sbjct: 562  TFFGSLFLVPFVGTEFVPNADFSITKIGLNTPVGTSLEATSKKVQQVEAILATYPEVRYT 621

Query: 653  YSQAGSGGLMTSDTARGGENWGRLQVELVDH----SAYHQVTQVLRDTARRIPALE-AKI 707
            Y+   SG          G+N   + V L D         ++ Q+ R     +  +   +I
Sbjct: 622  YATVNSGNTQ-------GKNNALITVRLKDRRDRTRGVAELNQMFRARLASVAGVTVTEI 674

Query: 708  EQPELFSFKTPLEIELTGYDLALLKRSADSLVNALSASDRFADINTSLRDGQPELSIRFD 767
              P+       +++ L G ++  L+R +++    +       D+++SL+  +P ++I   
Sbjct: 675  GMPDGAGSTKAIQLSLQGDNMDELRRLSEAAQARMRKIRGLVDLDSSLKADKPIVAINVK 734

Query: 768  HARLAALGMDAPTVANRIAQRVGGTVASQYTV-RDRKIDILVRSQLDERDQISDIDTLII 826
                + LG+    +   +   + G   S +    D+  D+ VR   ++R+ I D+  L+I
Sbjct: 735  RELASDLGVGVADIGTALRPLLSGDAISTWRAPDDQDYDVSVRLPREQRESIDDLSRLMI 794

Query: 827  NPDSSQP------IALSAVAEVSLQLGPSAINRISQQRVALVSANLAYGDLSDAVADAQQ 880
              + +        + L  +A++    GP  +NR   QR  +++ N+      +  +D  +
Sbjct: 795  ATNRTDSNGAPVLVPLRQIADIVKTTGPDVLNRRDLQREVMLTTNVNGRSSGEVASDIAK 854

Query: 881  ILAAQVLPTSVQARFGGQNEEMEHSFQSLKIALILAVFLVYLVMASQFESLLHPLLILVA 940
             L A  LP   + RF G  + M  S      AL LAV  +Y+++ASQF S   PL I+ +
Sbjct: 855  TLDAMHLPAGYRYRFEGSTKNMNESLVFAVEALALAVIFIYMILASQFASFAQPLAIMAS 914

Query: 941  VPMALAGSVLGLYITQTHLSVVVFIGLIMLAGIVVNNAIVLVDRINQLR----------S 990
            +P+ L G ++ L +  + L++   IG +ML G+V  NAI+LVD  NQ R           
Sbjct: 915  LPLTLIGVLVALLLFGSTLNMFSIIGFVMLMGLVTKNAILLVDFANQARRGTLLDASGKG 974

Query: 991  EGVEKLEAIRVAAKSRLRPIMMTTLTTVLGLLPMALGLGDGAEVRAPMAITVIFGLSLST 1050
              +E+ EA+  AA+ RLRPI+MTTL  + G+LP+A  LG+G E R P+  TVI G+  S+
Sbjct: 975  RVMERREALLEAARVRLRPILMTTLAMIFGMLPLAAALGEGGEQRGPLGQTVIGGVITSS 1034

Query: 1051 LLTLIVIPVLYAMFD 1065
            +LTL+V+PV+Y + +
Sbjct: 1035 ILTLVVVPVVYTVLE 1049