Pairwise Alignments

Query, 501 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (415), Expect = 6e-45
 Identities = 107/414 (25%), Positives = 205/414 (49%), Gaps = 5/414 (1%)

Query: 25  GISALFVVDLLDIFFLSLLGEHELAAAVGYAGSISFFTTLIGIGLSIALGALVSRSIGAK 84
           G+ A+ + +L+D FF+SLLG   LAA + Y   ++F    I +G+ + L   + R +G  
Sbjct: 38  GLVAILMFNLVDTFFISLLGTQALAA-ISYTFPVTFAVNCITMGIGVGLSTCIGRLLGQG 96

Query: 85  DVELAKRLLLNSAVVTTLISVFVSIVVTTFIPELVTLVGASGHTAELAESYLYILVPSLP 144
           D   A R+  +  ++  L+    S +    I  L  L+GAS     L + Y+ +   ++P
Sbjct: 97  DGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIPLIKEYMVVWYLTIP 156

Query: 145 FICLAMALGGALRSVGDAKLSMMSTLAGGGVNAVLDPIFIFLFA----MGIEGAALASVL 200
            + L MA   A+R+ GD K      +  G +N  LDP+ IF +     +GI+GAA+AS  
Sbjct: 157 LLVLPMAGNSAIRATGDTKTPAKIMMLAGLINGALDPLLIFGYGPFPELGIQGAAIASAF 216

Query: 201 ARITVFVIAGRGVMVKHQLLGKFNRSDFKADLKPIFAIAGPAILTNIATPIGNAFVTRAI 260
           + +   + +   ++ + +LL   +    + D + I  I  PA L+    PI  A +   +
Sbjct: 217 SWLGALIGSLYLLIKREKLLAIPSLPHLRDDWQQILKIGTPAALSTAMNPISGALLMIML 276

Query: 261 ADFGDAYVAGWAVLGRLVPVTFGMIFALSGAIGPIVGQNFGAGRFDRVRESLTKAIQFCT 320
           +  G A VA +    R+  +   ++ +L+ A+ P + QN GA    R    L  +++F  
Sbjct: 277 SSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMAQNLGAQNPARSFAGLFLSLRFSL 336

Query: 321 LYVVVMSLLLFLLKSQIVSLFDMKGDSAALIEFFCSYIAVFFIFSGILFVANASFNNLGK 380
           L+ +++ +++  L   + +LF  +     L+  +   + V + F G++ +  ++ N L +
Sbjct: 337 LFQLMVFIMMVPLSIPLAALFSQEQAVRDLLWHYLLVVPVSYGFQGVVMMLVSALNALHQ 396

Query: 381 AKYSTLFNVGKATLGTVPFVYVGAQLGGVYGVLIGQVIGSILFGVVGVWVAYRL 434
              +  ++  +  + T+P  ++G +L  + G+ IG  +G+IL G++G   A RL
Sbjct: 397 PLKAFQWSFMRLFVFTLPAAWIGGRLYNIEGLFIGIAVGNILGGLLGYLYALRL 450