Pairwise Alignments

Query, 501 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 450 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 89/448 (19%), Positives = 183/448 (40%), Gaps = 15/448 (3%)

Query: 1   MTQAKFVEGSILRHILVMSSTAAV-GISALFVVDLLDIFFLSLLGEHELAAAVGYAGSIS 59
           M Q K +E   + ++++     ++ G   + +  ++D  F+      E  A V ++  + 
Sbjct: 1   MKQVKKLENEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTIGAEGLAGVTFSFPVL 60

Query: 60  FFTTLIGIGLSIALGALVSRSIGAKDVELAKRLLLNSAVVTTLISVFVSIVVTTFIPELV 119
              + IG+ +     A++S S+G KD + A  +L  +     LIS+ ++      I  ++
Sbjct: 61  IAISSIGVMIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVI 120

Query: 120 TLVGASGHTAELAESYLYILVPSLPFICLAMALGGALRSVGDAKLSMMSTLAGGGVNAVL 179
           + +  S +       Y  I++        A++L   LR+ G  K SM+        N +L
Sbjct: 121 SFMNLSKNLESYVVGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSVFNIIL 180

Query: 180 DPIFIFLFAMGIEGAALASVLARITVFVIAGRGVMVKHQLLGKFNRSDFKAD-------L 232
           D + I +F  G+ GAA A+VLA+       G  + +KH L GK N    K         +
Sbjct: 181 DYMLIVVFNFGVMGAAAATVLAQ-----GLGSILYLKHFLSGKSNVKIGKNSPFLEFSLI 235

Query: 233 KPIFAIAGPAILTNIATPIGNAFVTRAIADFGDAY-VAGWAVLGRLVPVTFGMIFALSGA 291
           K I        +  +A  I           +G +  V+ + ++  +    + +   +S  
Sbjct: 236 KRIAKTGFSPFIMELAFGILMIVHNIQFMRYGSSLDVSAYGIVIYITSFLYMVYLGISEG 295

Query: 292 IGPIVGQNFGAGRFDRVRESLTKAIQFCTLYVVVMSLLLFLLKSQIVSLFDMKGDSAALI 351
           + P++  N GA +F+RV E L KA+    +  +   L +    + ++ +F+    +    
Sbjct: 296 VQPLISYNHGAKKFNRVFEILKKAVFVNAILGICSFLTILKFPNLLIKIFNPHDTNLIAT 355

Query: 352 EFFCSYIAVF-FIFSGILFVANASFNNLGKAKYSTLFNVGKATLGTVPFVYVGAQLGGVY 410
                 I  F  +  G+  V    F    + K +   ++G+  +  +P + +     G+ 
Sbjct: 356 TTIGLEIHNFAILIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILLPIYLGIK 415

Query: 411 GVLIGQVIGSILFGVVGVWVAYRLVDKV 438
           G+    V    L  ++ ++   +   K+
Sbjct: 416 GIWWATVFSEYLSFIITIYFITKEFKKI 443