Pairwise Alignments

Query, 501 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  127 bits (318), Expect = 1e-33
 Identities = 108/435 (24%), Positives = 212/435 (48%), Gaps = 26/435 (5%)

Query: 3   QAKFVEGSILRHILV-MSSTAAVGISALFVVDLLDIFFLSL-LGEHELAAAVGYAGSISF 60
           +++F+    ++ +LV +S  A +G+  + + +++D FF+   +G    AA  G A    F
Sbjct: 4   KSEFLGTEDVKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGT---AAFTGIALIFPF 60

Query: 61  FTTLIGIGLSIALG--ALVSRSIGAKDVELAKRLLLNSAVVTTLISVFVSIVVTTFIPEL 118
              ++  G++  +G  +L+SR +G  +++ A++   N+     ++SV ++IV   F+  +
Sbjct: 61  QMMIMAFGVTFGIGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPI 120

Query: 119 VTLVGASGHTAELAESYLYILVPSLPFICLAMALGGALRSVGDAKLSMMSTLAGGGVNAV 178
           + L+G S      A+ Y  I++    F    +A    +R+ G AK++M + +    +N +
Sbjct: 121 LNLLGTSADIFPYAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINII 180

Query: 179 LDPIFIFLFAMGIEGAALASVLARITVFVIAGRGVMVKHQL----LGKFNRSDFKADLK- 233
           LDPI I +F MGI+GAA+A+VL++     I G   ++KHQ       K+  +DF  +LK 
Sbjct: 181 LDPILIIVFNMGIKGAAIATVLSQ-----IIGVIYILKHQFGKNTSIKYAMNDFLINLKI 235

Query: 234 ---PIFAIA---GPAILTNIATPIGNAFVTRAIADFGDAYVAGWAVLGRLVPVTFGMIFA 287
               +F  A      I+++I   +GN  +       GD  +A + V+ R+  +    +  
Sbjct: 236 LKETVFIGASEFAKLIISSILLILGNNLLG---IYGGDIAIAIYGVIMRIAMLLLMPVLG 292

Query: 288 LSGAIGPIVGQNFGAGRFDRVRESLTKAIQFCTLYVVVMSLLLFLLKSQIVSLFDMKGDS 347
           +     PIVG N+G G+ +RV ES+  A+   +   ++  +L+ +   + + +F    + 
Sbjct: 293 IVQGFQPIVGYNYGKGQLNRVSESIKLALVGTSGLCLLGFILVMIFPEKFIQIFITDPEV 352

Query: 348 AALIEFFCSYIAVFFIFSGILFVANASFNNLGKAKYSTLFNVGKATLGTVPFVYVGAQLG 407
            +   F      +F    G        + +LGKAK + + +  + TL  +P + +     
Sbjct: 353 ISQGVFATRIFFMFSFLIGAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFF 412

Query: 408 GVYGVLIGQVIGSIL 422
           G+ G+     IG +L
Sbjct: 413 GLNGIWFSFPIGDLL 427