Pairwise Alignments

Query, 389 a.a., isovaleryl-CoA dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 392 a.a., Acyl-CoA dehydrogenases from Pseudomonas stutzeri RCH2

 Score =  246 bits (629), Expect = 6e-70
 Identities = 133/372 (35%), Positives = 213/372 (57%), Gaps = 1/372 (0%)

Query: 14  EDVDMLRDAVHDFAQHEIAPIAAKVDHDNAFPNEIWPVLGGMGLLGVTVPEEYGGANMGY 73
           +D  + +D+V  F Q E+AP   + + D+  P  +W  LG  GLLGV +PE+ GG   G 
Sbjct: 16  DDQTLFQDSVRRFLQQEVAPHYEQWEADHQLPRALWHRLGEAGLLGVDLPEQLGGCAAGV 75

Query: 74  LAHVVAMEEISRAS-ASIGLSYGAHSNLCVNQINRNGNAAQKAKYLPKLVSGEHIGALAM 132
              ++  EEISR     +   Y  H+N+ +  I+  GN AQ+A +LP++ +GE +GA+AM
Sbjct: 76  ETCLMICEEISRQGFGGLASGYNIHANIVMPYIHHLGNPAQQACWLPRMAAGEVLGAIAM 135

Query: 133 SEPNAGSDVVSMKLHARKEGDRYILNGNKMWITNGPDANTYVIYAKTDLTKGAHGITAFI 192
           +EP AGSD+ +M+  A+K    + LNG+K++ITNG  A+  ++ AKTD    A G++ F+
Sbjct: 136 TEPGAGSDLAAMRASAQKVPGGWKLNGSKVFITNGLLADMVIVCAKTDPNARARGVSLFL 195

Query: 193 VERGFKGFSQAQKLDKLGMRGSNTCELVFEDVEVPEENILGGLNNGVKVLMSGLDYERVV 252
           V+    GFS+ + + K+G   S+T EL F+D+ VPE+ +LG    G   LM  L  ER+ 
Sbjct: 196 VDTTLPGFSRGKAIRKIGQHASDTAELFFDDLIVPEDALLGDAGKGFAYLMQELPRERLG 255

Query: 253 LSGGPLGIMNACMDIVVPYIHEREQFGKSIGEFQLVQGKLADMYTGMNAAKAYVYSVAKS 312
           ++   +G ++  + + + Y+ +R  FG+ I +FQ  +  LA++   +   +AY     + 
Sbjct: 256 VAAQAIGAIDGALQLTLDYVQQRRAFGQRIADFQNTRFTLAEVRAHLEMGRAYFEKCLQR 315

Query: 313 CDRGETTRKDAAGAILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGT 372
             RGE +  DAA   L  +E+  +     +QL GG GY  EY   R   DA++  I AGT
Sbjct: 316 YARGEMSSTDAAALKLMLSEMQCRCVDQCLQLFGGYGYTLEYPISRFYVDARIQTIYAGT 375

Query: 373 SEIRRMLIGREL 384
           SEI + +I R++
Sbjct: 376 SEIMKEVIARDM 387