Pairwise Alignments

Query, 577 a.a., hypothetical ATP-dependent protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 786 a.a., ATP-dependent protease from Vibrio cholerae E7946 ATCC 55056

 Score =  305 bits (781), Expect = 5e-87
 Identities = 173/471 (36%), Positives = 268/471 (56%), Gaps = 29/471 (6%)

Query: 107 IAEKHVSYRYLSGNIRRSDLLGR------MVQSGNSSKYQAGALAECHYVFICAESLWKR 160
           + E+  +Y  L G I  +   G       +++ G+  K   G L       + A  + ++
Sbjct: 320 VVEESPNYHSLFGYIETATYKGTVFTDFSLIRPGSLHKANGGVL------LMDAVKVLEQ 373

Query: 161 EGLWDLLMQILTQKEYQ-------------ISHNLSPIPLNCKIILIGAGLIYSQIRSED 207
             +WD L + L  ++               +S +  PIPL+ KIIL G    Y  +   D
Sbjct: 374 PYVWDGLKRALRSRQLSFTSLEKEVTLTGTVSLDPEPIPLDVKIILFGDYRTYELLAHYD 433

Query: 208 WQFQRHFNLLAELAGELDLTRFKEAQYASWLQTVAQNVDAT-LEQSSLAPLFRHSARLTE 266
            +F   F + A+ A E+      E  YA ++ ++  + +    ++ ++A +  HS+R T 
Sbjct: 434 PEFSELFRVTADFADEMPRDADSELHYARFISSIVHDANMLHCDRKAIARIIEHSSRTTG 493

Query: 267 HQRRLSLSMLDLAQLMAQAKVYRGKSTINAAS---IERALSQANYRHNSSEEFSGQSFDD 323
            Q +LSL    +A L+ ++     ++  N      +E AL     R N  ++   ++F +
Sbjct: 494 DQTKLSLHSAHIANLLRESNYVAKQANANLIRQIHVEEALRNQELRVNRLQQSMMETFVN 553

Query: 324 NFINLPTEGAMVGQINGLTVIDAIDHCYGEPARITATVHYGDGEVADIERKSELGGNIHA 383
               + TEG  +GQ+N L+V+   DH +G P RITAT  YG+GE+ DIER  +LGG+IH+
Sbjct: 554 GTTLIQTEGVAIGQVNALSVLATSDHAFGMPNRITATTSYGEGEIIDIERNVDLGGSIHS 613

Query: 384 KGMMILSACLYRIFGRDAPLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQS 443
           KG+MILSA L  +FGR A + L   I FEQSY  +DGDSAS+AE+C ++SA ++QP  Q 
Sbjct: 614 KGVMILSAYLSSVFGRTARIPLTTTITFEQSYGGVDGDSASMAEFCAIVSAFSKQPNRQD 673

Query: 444 LAITGALDQFGNVQAIGGINEKIEGFFNLCERRGLTGKQGVIMPKSNMLQLNLHSKVITA 503
           +AITG+++QFG  Q IGG+NEKIEGFF++C  +G    QGVI+P+SNM  L L + V+ A
Sbjct: 674 IAITGSMNQFGESQPIGGLNEKIEGFFDVCTIKGRKDTQGVIIPRSNMHNLMLRADVVKA 733

Query: 504 VGKGLFHIYAIEHMDEAVELLMQMPAGVADEDNDFPAESLYGLVQQRLDKL 554
           V KG FHI+AI+H+ EA+E+    PAGVA +D  +P ++++GL Q +L+ L
Sbjct: 734 VEKGEFHIWAIDHVTEAIEIFTGKPAGVATDDGSYPVDTVFGLAQAKLNAL 784