Pairwise Alignments

Query, 577 a.a., hypothetical ATP-dependent protease (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 598 a.a., Lon protease family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  271 bits (692), Expect = 7e-77
 Identities = 169/451 (37%), Positives = 250/451 (55%), Gaps = 36/451 (7%)

Query: 124 SDLLGRM-VQSGNSSKYQAGALAECH--YVFICAESLWKREGLWDLLMQILTQKEYQISH 180
           S++LG++ V+ G      +G L + +  Y+ + A  L      W       T K   +  
Sbjct: 140 SEILGQVKVEHGGLVHKTSGYLEQANGGYLIVSANLLLANPRYWP------TVKAAVLGE 193

Query: 181 NLSPIPLNC----------------KIILIGAGLIYSQIRSEDWQFQRHFNLLAELAGEL 224
            +SPI  NC                K+I++G       +   D        L +EL  +L
Sbjct: 194 TVSPI--NCDPKSPLPNRLGSSYDVKLIVVGDRTQLGDLDFLDADIHSGLCLFSELELDL 251

Query: 225 DLTRFKEAQYASWLQTVAQNVDA-TLEQSSLAPLFRHSARLTEHQRRLSLSMLDLAQLMA 283
            +       Y  +L+ + +  +  +L  S++  L    AR TE Q    L ++    L+ 
Sbjct: 252 KIEEETIEDYLGYLRWLCEQYNLPSLTCSAIQSLMTAGARYTEDQYYAPLCLMWHRALLE 311

Query: 284 QAKVYRGKSTINAASIERALSQANYRHNSSEEFSGQSFDDNFINLPTEGAMVGQINGLTV 343
           +A++   +  I+A  IE AL +   R +   E +     D  + + T+G  VGQ+NGLTV
Sbjct: 312 EARLESEEPLIDAEHIEIALDKRYLRESYLPERALDDILDGQVIIETQGEQVGQVNGLTV 371

Query: 344 IDAIDHC--YGEPARITATVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGRDA 401
           I+   H   YGEPARI+  +H+GDG++AD+ERK ELGGN+HAKGMMI+ A +      D 
Sbjct: 372 IEVTGHPMPYGEPARISCVIHFGDGDIADVERKVELGGNLHAKGMMIMQAFVSSALNLDG 431

Query: 402 PLHLNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGG 461
            L  +A+IVFEQSY E+DGDSASLAE C L+SA++E PI Q +A+TGA+DQFG VQA+GG
Sbjct: 432 SLPFSASIVFEQSYSEVDGDSASLAELCSLVSALSEYPIDQQIAVTGAVDQFGRVQAVGG 491

Query: 462 INEKIEGFFNLCERRGLTGKQGVIMPKSNMLQLNLHSKVITAVGKGLFHIYAIEHMDEAV 521
           +NEKIEGF+ +C  +GLTG+QGVI+P SN+  L LH  V+ ++  G F+I+ +  +DEA+
Sbjct: 492 LNEKIEGFYRVCCHQGLTGEQGVILPSSNLKHLALHKSVVESIKNGEFNIWPVSTVDEAI 551

Query: 522 ELLMQMPAGVADEDNDFPAESLYGLVQQRLD 552
            LLM  P    DED      S+   + +R+D
Sbjct: 552 PLLMGKPFRGEDED------SVIAKIAERID 576